RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 CCDC38Q502W7 563 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 DUPD1Q68J44 220 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 DET1Q7L5Y6 550 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 TAS2R42Q7RTR8 314 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 ADGRG6Q86SQ4 1221 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 LRRTM4Q86VH4 590 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 ZNF398Q8TD17 642 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 BRSK1Q8TDC3 778 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 GPBAR1Q8TDU6 330 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 PATE1Q8WXA2 126 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 IFT81Q8WYA0 676 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 DNAJC1Q96KC8 554 aaKnown RBP9.56□□□□□ -0.88
HERC3-204ENST00000422770 FAM96AQ9H5X1 160 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 ASB8Q9H765 288 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 TRIM39Q9HCM9 518 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 IL26Q9NPH9 171 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 KLC4Q9NSK0 619 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 SPATS2LQ9NUQ6 558 aaKnown RBP9.56□□□□□ -0.88
HERC3-204ENST00000422770 NFKBIL1Q9UBC1 381 aaPredicted RBP9.56□□□□□ -0.88
HERC3-204ENST00000422770 APPL1Q9UKG1 709 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 CLCA2Q9UQC9 943 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 MSRB2Q9Y3D2 182 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 NEU2Q9Y3R4 380 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 SLC30A1Q9Y6M5 507 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 U3KQA8 63 aa9.56□□□□□ -0.88
HERC3-204ENST00000422770 EME2A4GXA9 379 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 C1QTNF9BB2RNN3 333 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 NUAK1O60285 661 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 NOBOXO60393 691 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 SRP72O76094 671 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 TMEM63AO94886 807 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 SEC31AO94979 1220 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 MT-CO3P00414 261 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 RPLP0P05388 317 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 GP1BAP07359 652 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 C1QTNF9P0C862 333 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 ALDH4A1P30038 563 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 MC4RP32245 332 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 HADHAP40939 763 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 MAPK9P45984 424 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 ZNF140P52738 457 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 ITGA8P53708 1063 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 SESN2P58004 480 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 TUBB4BP68371 445 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 INSM1Q01101 510 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 TMEM115Q12893 351 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 TARDBPQ13148 414 aaKnown RBP eCLIP9.55□□□□□ -0.88
HERC3-204ENST00000422770 LRP8Q14114 963 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 AMZ1Q400G9 498 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 KHDC1Q4VXA5 237 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 LDLRAP1Q5SW96 308 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 GPRC6AQ5T6X5 926 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 ANKRD22Q5VYY1 191 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 KCTD11Q693B1 232 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 DENND5AQ6IQ26 1287 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 UNQ6494/PRO21346Q6UXR6 183 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 C4orf22Q6V702 233 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 TMPRSS7Q7RTY8 843 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 TMPRSS12Q86WS5 348 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 ZNF761Q86XN6 746 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 NRROSQ86YC3 692 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 IFT20Q8IY31 132 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 PPHLN1Q8NEY8 458 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 DCUN1D1Q96GG9 259 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 DEPDC7Q96QD5 511 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 VPS35Q96QK1 796 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 GFM1Q96RP9 751 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 STN1Q9H668 368 aaKnown RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 FAM114A2Q9NRY5 505 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 GRHL1Q9NZI5 618 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 LRIT1Q9P2V4 623 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 PCYT1BQ9Y5K3 369 aaPredicted RBP9.55□□□□□ -0.88
HERC3-204ENST00000422770 AK5Q9Y6K8 562 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 RNF215Q9Y6U7 377 aa9.55□□□□□ -0.88
HERC3-204ENST00000422770 GOLGA8MH3BSY2 632 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 NDC80O14777 642 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 KMOO15229 486 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CTIFO43310 598 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 VEGFDO43915 354 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CSO75390 466 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 DKK1O94907 266 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 RALBP11234 206 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 SLC2A4P14672 509 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 ZNF7P17097 686 aaPredicted RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 VCLP18206 1134 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 GRIA1P42261 906 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CARSP49589 748 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 PLTPP55058 493 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 NFATC2Q13469 925 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 SEMA5AQ13591 1074 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CUL1Q13616 776 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 KCNJ11Q14654 390 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 TRADDQ15628 312 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 SMAD1Q15797 465 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 MAP9Q49MG5 647 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 FNBP1LQ5T0N5 605 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CERCAMQ5T4B2 595 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms