RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ADPRHP54922 357 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CREB5Q02930 508 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CNGA3Q16281 694 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 MAP7D1Q3KQU3 841 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 PPM1JQ5JR12 505 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 TEDDM1Q5T9Z0 273 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 LRRC66Q68CR7 880 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 STRA8Q7Z7C7 330 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CMC1Q7Z7K0 106 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CACTIN-AS1Q8N1I8 211 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 DCLK2Q8N568 766 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 FRMD1Q8N878 549 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 GANCQ8TET4 914 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 MFSD3Q96ES6 412 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ZNF778Q96MU6 729 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 AGAP2Q99490 1192 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 TPSD1Q9BZJ3 242 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 DENND2DQ9H6A0 471 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 ZFYVE1Q9HBF4 777 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 WSB2Q9NYS7 404 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
DDB1-202ENST00000414411 IL17CQ9P0M4 197 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 TMEM216Q9P0N5 145 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 COPG2Q9UBF2 871 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 RIMKLBQ9ULI2 386 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 SOX13Q9UN79 622 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ZNF711Q9Y462 761 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 KCTD3Q9Y597 815 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ARL5AQ9Y689 179 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 SDK1Q7Z5N4 2213 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 C1orf232A0A0U1RR37 186 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 HEATR9A2RTY3 570 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 GYG2O15488 501 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 GSC2O15499 205 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 LAMTOR5O43504 91 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 ITM2AO43736 263 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 GPR37L1O60883 481 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 LYPLA1O75608 230 aaPredicted RBP9.87□□□□□ -0.83
DDB1-202ENST00000414411 CRTAMO95727 393 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 OXTRP30559 389 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 STC1P52823 247 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 DMWDQ09019 674 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 HSP90AA5PQ58FG0 334 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 TMEM31Q5JXX7 168 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 NEK5Q6P3R8 708 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 TSSK4Q6SA08 328 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 FAM124AQ86V42 546 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 KCNMB4Q86W47 210 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 TREML1Q86YW5 311 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 WDR75Q8IWA0 830 aaKnown RBP9.87□□□□□ -0.83
DDB1-202ENST00000414411 RAVER1Q8IY67 606 aaKnown RBP9.87□□□□□ -0.83
DDB1-202ENST00000414411 OR14C36Q8NHC7 312 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 PIWIL2Q8TC59 973 aaKnown RBP9.87□□□□□ -0.83
DDB1-202ENST00000414411 RLN3Q8WXF3 142 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 PEX13Q92968 403 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 MCMBPQ9BTE3 642 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 BTBD1Q9H0C5 482 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 STN1Q9H668 368 aaKnown RBP9.87□□□□□ -0.83
DDB1-202ENST00000414411 SGK2Q9HBY8 427 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 MRM3Q9HC36 420 aaKnown RBP9.87□□□□□ -0.83
DDB1-202ENST00000414411 TREX1Q9NSU2 369 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 TAS2R1Q9NYW7 299 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 TCAF1Q9Y4C2 921 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 SCN8AQ9UQD0 1980 aa9.87□□□□□ -0.83
DDB1-202ENST00000414411 KNL1Q8NG31 2342 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 IGHV1OR15-9A0A0B4J2B8 117 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 C2orf81A6NN90 581 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 PSMD11O00231 422 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 AXIN1O15169 862 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 SERPINA6P08185 405 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 LPOP22079 712 aaPredicted RBP9.86□□□□□ -0.83
DDB1-202ENST00000414411 VAMP1P23763 118 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 GRK2P25098 689 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 CALRP27797 417 aaKnown RBP9.86□□□□□ -0.83
DDB1-202ENST00000414411 GMPRP36959 345 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 SLC1A6P48664 564 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 CCNG1P51959 295 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 ZNF140P52738 457 aaPredicted RBP9.86□□□□□ -0.83
DDB1-202ENST00000414411 CSE1LP55060 971 aaKnown RBP9.86□□□□□ -0.83
DDB1-202ENST00000414411 ACVR1Q04771 509 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 LAMB3Q13751 1172 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 PTPRCAPQ14761 206 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 AGERQ15109 404 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 CCDC153Q494R4 210 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 TMEM259Q4ZIN3 620 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 TSTD2Q5T7W7 516 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 TLDC1Q6P9B6 456 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 GLT6D1Q7Z4J2 308 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 HSD11B1LQ7Z5J1 315 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 TECPR1Q7Z6L1 1165 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 CLEC14AQ86T13 490 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 C10orf107Q8IVU9 208 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 ENDOVQ8N8Q3 282 aaKnown RBP9.86□□□□□ -0.83
DDB1-202ENST00000414411 OR13J1Q8NGT2 312 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 NELL1Q92832 810 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 TOE1Q96GM8 510 aaKnown RBP9.86□□□□□ -0.83
DDB1-202ENST00000414411 ATXN7L3BQ96GX2 97 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 COQ10AQ96MF6 247 aa9.86□□□□□ -0.83
DDB1-202ENST00000414411 EBF4Q9BQW3 602 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms