RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 LUC7L3O95232 432 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 OR8G3PP0DMU2 310 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 BRAFP15056 766 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NPR1P16066 1061 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PDE6AP16499 860 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PTPN1P18031 435 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NT5EP21589 574 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PTX3P26022 381 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 AOAHP28039 575 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 EPHA8P29322 1005 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 YWHABP31946 246 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 OTX2P32243 289 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SREBF1P36956 1147 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CRATP43155 626 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CCR10P46092 362 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MTNR1BP49286 362 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ENTPD1P49961 510 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SLC26A2P50443 739 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SERPINB9P50453 376 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PRKAA2P54646 552 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 EPHB4P54760 987 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 BCAR1P56945 870 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ANTXR2P58335 489 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SPCS3P61009 180 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 HTRA4P83105 476 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SMAD3P84022 425 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PPP2R2BQ00005 443 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MAT1AQ00266 395 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 AMPD2Q01433 879 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PPP3CAQ08209 521 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SPOCK1Q08629 439 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MYO1EQ12965 1108 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 AIMP2Q13155 320 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ADAM9Q13443 819 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TUBB3Q13509 450 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TSTA3Q13630 321 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 IRF3Q14653 427 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NR1I3Q14994 352 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PRKD1Q15139 912 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ANGPT1Q15389 498 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GPR68Q15743 365 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NTRK2Q16620 822 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MAPK6Q16659 721 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PNLIPRP3Q17RR3 467 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 WHAMMP3Q1A5X7 153 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 HYAL4Q2M3T9 481 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 P3H1Q32P28 736 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 HNRNPA1L2Q32P51 320 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MOGAT2Q3SYC2 334 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CRY2Q49AN0 593 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ZCWPW2Q504Y3 356 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MPPE1Q53F39 396 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 FASTKD1Q53R41 847 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 C2CD6Q53TS8 623 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 YIF1BQ5BJH7 314 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ZMAT1Q5H9K5 638 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CRB2Q5IJ48 1285 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 RAB41Q5JT25 222 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NT5DC1Q5TFE4 455 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ARHGEF16Q5VV41 709 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 EEF1DP3Q658K8 133 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SLFN13Q68D06 897 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NAPEPLDQ6IQ20 393 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TTC33Q6PID6 262 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ZC3H14Q6PJT7 736 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PAQR3Q6TCH7 311 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 IDO2Q6ZQW0 420 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ERN2Q76MJ5 926 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 COPS6Q7L5N1 327 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TMPRSS9Q7Z410 1059 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 KCTD20Q7Z5Y7 419 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ANKS1BQ7Z6G8 1248 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TAC4Q86UU9 113 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SERINC5Q86VE9 423 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ZFAND4Q86XD8 727 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CPNE8Q86YQ8 564 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SLC38A6Q8IZM9 456 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 Q8N1X5 172 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GALNT4Q8N4A0 578 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 LZTR1Q8N653 840 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 COMMD1Q8N668 190 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ANKRD13CQ8N6S4 541 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ENDOVQ8N8Q3 282 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ASCC1Q8N9N2 400 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 KDM1BQ8NB78 822 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 AGBL3Q8NEM8 1001 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF397Q8NF99 534 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 OR13C3Q8NGS6 347 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 EXD1Q8NHP7 514 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 DUSP19Q8WTR2 217 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NELFBQ8WX92 580 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PSPC1Q8WXF1 523 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CPT1BQ92523 772 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 RNF31Q96EP0 1072 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 RCC1LQ96I51 464 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TRAPPC9Q96Q05 1148 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 INTS14Q96SY0 518 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SSX3Q99909 188 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms