RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 BCAT2O15382 392 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SNX3O60493 162 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CLDN11O75508 207 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PALMO75781 387 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SEMA4FO95754 770 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 F9P00740 461 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ADH4P08319 380 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PLEKP08567 350 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CD59P13987 128 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 NQO1P15559 274 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CHRNB2P17787 502 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PAX7P23759 505 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CTNNA1P35221 906 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SOX5P35711 763 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 FLT3P36888 993 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 STAT1P42224 750 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PSMD8P48556 350 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 STK19P49842 368 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 KLK7P49862 253 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CDH4P55283 916 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 JAM2P57087 298 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 MRPS35P82673 323 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CDR2Q01850 454 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 GRIK2Q13002 908 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 BIRC2Q13490 618 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 DHX34Q14147 1143 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CST6Q15828 149 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SLC25A52Q3SY17 297 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 C2CD6Q53TS8 623 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 BRMS1LQ5PSV4 323 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 C9orf64Q5T6V5 341 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 AGBL4Q5VU57 503 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SFMBT2Q5VUG0 894 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CAPRIN2Q6IMN6 1127 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CXorf57Q6NSI4 855 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 TRIM72Q6ZMU5 477 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 USP30Q70CQ3 517 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 IRF2BP2Q7Z5L9 587 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 MRGPRGQ86SM5 289 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 C14orf80Q86SX3 495 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PIP4P1Q86T03 277 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 MMAAQ8IVH4 418 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 STK40Q8N2I9 435 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ENDOVQ8N8Q3 282 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 OR52K2Q8NGK3 314 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SLC20A1Q8WUM9 679 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 NEU4Q8WWR8 484 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PTPRN2Q92932 1015 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 NT5C3BQ969T7 300 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 VOPP1Q96AW1 172 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 BIRC7Q96CA5 298 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ALG14Q96F25 216 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PGAP3Q96FM1 320 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 RUNDC3BQ96NL0 473 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 GNRHR2Q96P88 292 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 KRT12Q99456 494 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 OMDQ99983 421 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ERP44Q9BS26 406 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 FEM1AQ9BSK4 669 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 NSRP1Q9H0G5 558 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 TKTL2Q9H0I9 626 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 CARD9Q9H257 536 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 NEUROG2Q9H2A3 272 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 C6orf106Q9H6K1 298 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SGK2Q9HBY8 427 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PPANQ9NQ55 473 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ANLNQ9NQW6 1124 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 METTL5Q9NRN9 209 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 PIGVQ9NUD9 493 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ARHGEF38Q9NXL2 777 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 NOCTQ9UK39 431 aaKnown RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ANGPTL2Q9UKU9 493 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 TFR2Q9UP52 801 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.34□□□□□ -1.55
LINC00342-201ENST00000412393 SNX10Q9Y5X0 201 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 HS3ST4Q9Y661 456 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 ANKRD36A6QL64 1941 aa5.34□□□□□ -1.55
LINC00342-201ENST00000412393 MAP1BP46821 2468 aaKnown RBP5.34□□□□□ -1.56
LINC00342-201ENST00000412393 CACNA1BQ00975 2339 aa5.34□□□□□ -1.56
LINC00342-201ENST00000412393 GOLGA4Q13439 2230 aaKnown RBP5.33□□□□□ -1.56
LINC00342-201ENST00000412393 ACACBO00763 2458 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 PLXNB3Q9ULL4 1909 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 SPAARA0A1B0GVQ0 90 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 A0A1B0GVT2 93 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 TCRBV5S2A0A599 114 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 ANKRD34BA5PLL1 514 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 LRRC72A6NJI9 287 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 ENO4A6NNW6 628 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 I6L893 689 aaPredicted RBP5.33□□□□□ -1.56
LINC00342-201ENST00000412393 EPHB6O15197 1021 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 MID1O15344 667 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 HNRNPCL1O60812 293 aaKnown RBP5.33□□□□□ -1.56
LINC00342-201ENST00000412393 GJB3O75712 270 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 RNASEH2AO75792 299 aaKnown RBP5.33□□□□□ -1.56
LINC00342-201ENST00000412393 NEBLO76041 1014 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 CNTN5O94779 1100 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 SNUPNO95149 360 aaKnown RBP5.33□□□□□ -1.56
LINC00342-201ENST00000412393 CER1O95813 267 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 IL1BP01584 269 aa5.33□□□□□ -1.56
LINC00342-201ENST00000412393 RHOCP08134 193 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms