RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF830Q96NB3 372 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-220ENST00000411464 GBP4Q96PP9 640 aa16.45■□□□□ 0.22
MRPL55-220ENST00000411464 POT1Q9NUX5 634 aa16.45■□□□□ 0.22
MRPL55-220ENST00000411464 SLC23A2Q9UGH3 650 aa16.45■□□□□ 0.22
MRPL55-220ENST00000411464 TLK1Q9UKI8 766 aa16.45■□□□□ 0.22
MRPL55-220ENST00000411464 PCDHGA6Q9Y5G7 932 aa16.45■□□□□ 0.22
MRPL55-220ENST00000411464 A0A1B0GTH6 734 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 GOLGA6L22H0YM25 854 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 KIF1CO43896 1103 aaKnown RBP16.44■□□□□ 0.22
MRPL55-220ENST00000411464 VPS4BO75351 444 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 RECKO95980 971 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 SLC4A1P02730 911 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 FGF5P12034 268 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 IDSP22304 550 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 RPL10P27635 214 aaKnown RBP16.44■□□□□ 0.22
MRPL55-220ENST00000411464 CAPZBP47756 277 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 PMS2P54278 862 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 DCDC1P59894 354 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 GALNT3Q14435 633 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 PDPK2PQ6A1A2 396 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 IRGCQ6NXR0 463 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 ABRAXAS1Q6UWZ7 409 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 FAM92BQ6ZTR7 304 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 TMEM135Q86UB9 458 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 RBM12BQ8IXT5 1001 aaKnown RBP16.44■□□□□ 0.22
MRPL55-220ENST00000411464 TRAM1L1Q8N609 369 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 KLHL6Q8WZ60 621 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 HDAC11Q96DB2 347 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-220ENST00000411464 BPIFA3Q9BQP9 254 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 TIMM29Q9BSF4 260 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 MAGEE1Q9HCI5 957 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 PDE7BQ9NP56 450 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 SLC40A1Q9NP59 571 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 DTLQ9NZJ0 730 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 VPS4AQ9UN37 437 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 SHOC2Q9UQ13 582 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 NBASA2RRP1 2371 aa16.44■□□□□ 0.22
MRPL55-220ENST00000411464 GOLGA6L3A6NEY3 463 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 TTLL8A6PVC2 850 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 KCNK1O00180 336 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 VEGFDO43915 354 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 CDK14O94921 469 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 SERPINC1P01008 464 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 PIRTP0C851 137 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 VCLP18206 1134 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 SLC10A2Q12908 348 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-220ENST00000411464 DNASE1L3Q13609 305 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 GPR18Q14330 331 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 FIGNQ5HY92 759 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 HGSNATQ68CP4 663 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 WASH2PQ6VEQ5 465 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 TMC3Q7Z5M5 1100 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 EFCAB3Q8N7B9 438 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 RSC1A1Q92681 617 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-220ENST00000411464 GPR63Q9BZJ6 419 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 LHX9Q9NQ69 397 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 WASH6PQ9NQA3 447 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 TRIM10Q9UDY6 481 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 EPHA6Q9UF33 1036 aa16.43■□□□□ 0.22
MRPL55-220ENST00000411464 OR52A4PA6NMU1 304 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 C21orf140B9A014 251 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 MTX2O75431 263 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 SERPING1P05155 500 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 BRAFP15056 766 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 NELFEP18615 380 aaKnown RBP16.42■□□□□ 0.22
MRPL55-220ENST00000411464 NR1I3Q14994 352 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 AGAP9Q5VTM2 703 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 CCDC70Q6NSX1 233 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 ALKBH5Q6P6C2 394 aaKnown RBP16.42■□□□□ 0.22
MRPL55-220ENST00000411464 APLFQ8IW19 511 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-220ENST00000411464 PQLC3Q8N755 202 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 CNTD1Q8N815 330 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 CT55Q8WUE5 264 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 SEC14L1Q92503 715 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 FAF2Q96CS3 445 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 NFKBIL1Q9UBC1 381 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-220ENST00000411464 RARRES3Q9UL19 164 aa16.42■□□□□ 0.22
MRPL55-220ENST00000411464 A0A087X0T9 212 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 AGFG2O95081 481 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 FAM228BP0C875 321 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 HALP42357 657 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 DRG2P55039 364 aaKnown RBP16.41■□□□□ 0.22
MRPL55-220ENST00000411464 IFI35P80217 286 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-220ENST00000411464 PPIDQ08752 370 aaKnown RBP16.41■□□□□ 0.22
MRPL55-220ENST00000411464 SEMA5AQ13591 1074 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 PCSK7Q16549 785 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 NT5DC3Q86UY8 548 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 BPHLQ86WA6 291 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-220ENST00000411464 ZNF547Q8IVP9 402 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 SIDT2Q8NBJ9 832 aaKnown RBP16.41■□□□□ 0.22
MRPL55-220ENST00000411464 GDAP1Q8TB36 358 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 TTC25Q96NG3 672 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 TRIB3Q96RU7 358 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 GPR87Q9BY21 358 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 RAB33BQ9H082 229 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms