RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF184Q99676 751 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 RAD18Q9NS91 495 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 A0A0C4DFX4 3053 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 UNC80Q8N2C7 3258 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 AGAP14A8MT82 685 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 RAD51BO15315 384 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 POP4O95707 220 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 HNRNPA1P09651 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CA8P35219 290 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CTNNB1P35222 781 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 NFATC2Q13469 925 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PCBP2Q15366 365 aaKnown RBP eCLIP13.44□□□□□ -0.264e-8■■□□□ 14
LIMS1-205ENST00000410093 GEN1Q17RS7 908 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 MYLK3Q32MK0 819 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PITRM1Q5JRX3 1037 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ATXN7L2Q5T6C5 722 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TMEM198Q66K66 360 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PTRHD1Q6GMV3 140 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 RNF165Q6ZSG1 346 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 DHDDSQ86SQ9 333 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CAMK1DQ8IU85 385 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CMTM8Q8IZV2 173 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 MRPL43Q8N983 215 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CATSPER1Q8NEC5 780 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 WFDC5Q8TCV5 224 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 KCNV2Q8TDN2 545 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SLC26A7Q8TE54 656 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 MOCOSQ96EN8 888 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SCRN2Q96FV2 425 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PPP1R36Q96LQ0 422 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF570Q96NI8 536 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SLC46A2Q9BY10 475 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 RIC8BQ9NVN3 520 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 EVLQ9UI08 416 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 DNAJC15Q9Y5T4 150 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PRUNE2Q8WUY3 3088 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CHD9Q3L8U1 2897 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 A0A1W2PRU2 124 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 TRIM38O00635 465 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 SLC9A3R1O14745 358 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CASQ2O14958 399 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 NRP2O60462 931 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 STAMBPO95630 424 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 MT-CO1P00395 513 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 RB1P06400 928 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 LINC00271P0C7V0 271 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 SRCP12931 536 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 ACRV1P26436 265 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 MRPS35P82673 323 aaKnown RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 FOXM1Q08050 763 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 GPM6BQ13491 265 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CCNIQ14094 377 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CDKN3Q16667 212 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF423Q2M1K9 1284 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 AGKQ53H12 422 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 IRAK1BP1Q5VVH5 260 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 IRGCQ6NXR0 463 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 SERPINA9Q86WD7 417 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 HPS6Q86YV9 775 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 MYO1HQ8N1T3 1032 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 MIER2Q8N344 545 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 PLEKHG4BQ96PX9 1271 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CDRT15Q96T59 188 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 TCF25Q9BQ70 676 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CORO1BQ9BR76 489 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 SUV39H2Q9H5I1 410 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 ASB8Q9H765 288 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 PRDM6Q9NQX0 595 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 CD274Q9NZQ7 290 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 PCTPQ9UKL6 214 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 PSMD13Q9UNM6 376 aa13.43□□□□□ -0.26
LIMS1-205ENST00000410093 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-205ENST00000410093 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 WASH3PC4AMC7 463 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 XYLBO75191 536 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 NIPSNAP2O75323 286 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 BCAS2O75934 225 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 NPPAP01160 153 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF30P17039 623 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 MSH3P20585 1137 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 HNF1BP35680 557 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 NSG1P42857 185 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 PIK3CGP48736 1102 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 SESN3P58005 492 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 LRP8Q14114 963 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms