RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 FKBP9P1Q75LS8 142 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 AADATQ8N5Z0 425 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 CYGBQ8WWM9 190 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 SLC30A3Q99726 388 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 RPF2Q9H7B2 306 aaKnown RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 PKD2L2Q9NZM6 624 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 EBF1Q9UH73 591 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 GBF1Q92538 1859 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 SH3PXD2BA1X283 911 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 E2F3O00716 465 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 PFDN1O60925 122 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 ZDHHC11BP0C7U3 371 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 CDH1P12830 882 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 CYBAP13498 195 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 CR2P20023 1033 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 HRH2P25021 359 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 PRDX3P30048 256 aaKnown RBP16.52■□□□□ 0.24
LIMS2-208ENST00000410011 TTPAP49638 278 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 CTBSQ01459 385 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 MRPL58Q14197 206 aaKnown RBP16.52■□□□□ 0.24
LIMS2-208ENST00000410011 GPRIN3Q6ZVF9 776 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 MIB1Q86YT6 1006 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 OR4K2Q8NGD2 314 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 OR2T11Q8NH01 316 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 SPATA17Q96L03 361 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 CHID1Q9BWS9 393 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 SPO11Q9Y5K1 396 aa16.52■□□□□ 0.24
LIMS2-208ENST00000410011 BTN3A1O00481 513 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 B4GALT3O60512 393 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 PIRTP0C851 137 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 RPL10P27635 214 aaKnown RBP16.52■□□□□ 0.23
LIMS2-208ENST00000410011 IL2P60568 153 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 PTPRNQ16849 979 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 KLHL35Q6PF15 583 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 GLT6D1Q7Z4J2 308 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 CIR1Q86X95 450 aaPredicted RBP16.52■□□□□ 0.23
LIMS2-208ENST00000410011 KCNJ9Q92806 393 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 PDLIM5Q96HC4 596 aaKnown RBP16.52■□□□□ 0.23
LIMS2-208ENST00000410011 FBXL20Q96IG2 436 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 TBCCD1Q9NVR7 557 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 GALPQ9UBC7 116 aa16.52■□□□□ 0.23
LIMS2-208ENST00000410011 OR6C75A6NL08 312 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 INSIG1O15503 277 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 PRLP01236 227 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 PRSS56P0CW18 603 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 JUNBP17275 347 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-208ENST00000410011 IL12AP29459 219 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 GNA12Q03113 381 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 TAF10Q12962 218 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-208ENST00000410011 ATP6AP1LQ52LC2 224 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 VARS2Q5ST30 1063 aaKnown RBP16.51■□□□□ 0.23
LIMS2-208ENST00000410011 DLEU7Q6UYE1 221 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 Q6ZSR9 355 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 IFNEQ86WN2 208 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 MDGA1Q8NFP4 955 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 MYEOVQ96EZ4 313 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 NPEPPSL1A6NEC2 478 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 F5H5T6 163 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 H7C0S8 307 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 KDELR3O43731 214 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 CPNE6O95741 557 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 LPOP22079 712 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-208ENST00000410011 AGTR2P50052 363 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 HK3P52790 923 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 PMS2P3Q13401 168 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 PCBP2Q15366 365 aaKnown RBP eCLIP16.51■□□□□ 0.234e-6■■■■□ 25.7
LIMS2-208ENST00000410011 UGT3A1Q6NUS8 523 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 GALNT13Q8IUC8 556 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 MAGEE2Q8TD90 523 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-208ENST00000410011 NSMCE2Q96MF7 247 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 RDH12Q96NR8 316 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 SLAMF8Q9P0V8 285 aa16.51■□□□□ 0.23
LIMS2-208ENST00000410011 TRMT6Q9UJA5 497 aaKnown RBP16.51■□□□□ 0.23
LIMS2-208ENST00000410011 ZFC3H1O60293 1989 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 SYNCRIPO60506 623 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 NCK1P16333 377 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 HMOX2P30519 316 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 RAB39AQ14964 217 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 GLYATQ6IB77 296 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 CD200R1Q8TD46 325 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 TDRD1Q9BXT4 1180 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 INTS7Q9NVH2 962 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 NUDT4Q9NZJ9 180 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 UBA2Q9UBT2 640 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 CDC14AQ9UNH5 594 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 FAF1Q9UNN5 650 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 TNPO3Q9Y5L0 923 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 CROCCQ5TZA2 2017 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 A0A0D9SEW6 157 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 H3BMQ9 156 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 DEAF1O75398 565 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 SEC24DO94855 1032 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 GALK1P51570 392 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 ALDH3A2P51648 485 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 CDH4P55283 916 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms