RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 KCNK13Q9HB14 408 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 HMG20AQ9NP66 347 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 SAYSD1Q9NPB0 183 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 MRPL40Q9NQ50 206 aaKnown RBP5.47□□□□□ -1.53
CLK1-202ENST00000409403 NCKIPSDQ9NZQ3 722 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 GCNT4Q9P109 453 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.47□□□□□ -1.53
CLK1-202ENST00000409403 MUTYHQ9UIF7 546 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 DAPK2Q9UIK4 370 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CDH22Q9UJ99 828 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 APPL1Q9UKG1 709 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 GRID1Q9ULK0 1009 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CORO2BQ9UQ03 480 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 SHOC2Q9UQ13 582 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 PCDHAC2Q9Y5I4 1007 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 SNX13Q9Y5W8 968 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 GAKO14976 1311 aa5.46□□□□□ -1.53
CLK1-202ENST00000409403 CLRN2A0PK11 232 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ARHGEF37A1IGU5 675 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 EPOPA6NHQ4 379 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 EVPLLA8MZ36 301 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 H3BNH8 94 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 RNF103O00237 685 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CCNT1O60563 726 aaKnown RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A9O60656 530 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 SPAG6O75602 509 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 MATN4O95460 622 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CRYZL1O95825 349 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 AMHP03971 560 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UBL4AP11441 157 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A6P19224 532 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ABCB4P21439 1286 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A1P22309 533 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A4P22310 534 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CFPP27918 469 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A3P35503 534 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A5P35504 534 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CPOXP36551 454 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 PRIM2P49643 509 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 SOX8P57073 446 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 RAP2BP61225 183 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 STX1BP61266 288 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 YWHAGP61981 247 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLK1-202ENST00000409403 OCA2Q04671 838 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 DUSP8Q13202 625 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 GRM7Q14831 915 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 OXA1LQ15070 435 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 BMT2Q1RMZ1 405 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 DCAF6Q58WW2 860 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CAVIN4Q5BKX8 364 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 FSCBQ5H9T9 825 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 TEDDM1Q5T9Z0 273 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 KRT39Q6A163 491 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 IYDQ6PHW0 289 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 C16orf89Q6UX73 402 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 FASTKD5Q7L8L6 764 aaKnown RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 ARCQ7LC44 396 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 AMIGO2Q86SJ2 522 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 XYLT1Q86Y38 959 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 GRAMD2AQ8IUY3 354 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ESX1Q8N693 406 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 BANPQ8N9N5 519 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ZSCAN18Q8TBC5 510 aaPredicted RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 TBC1D15Q8TC07 691 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 PNPT1Q8TCS8 783 aaKnown RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 ADAMTS16Q8TE57 1224 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 AFG1LQ8WV93 481 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CCDC127Q96BQ5 260 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 NRBF2Q96F24 287 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 TMEM176AQ96HP8 235 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ZBED3Q96IU2 234 aaPredicted RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 C9orf72Q96LT7 481 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 TUBA1CQ9BQE3 449 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 SYT11Q9BT88 431 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 THAP2Q9H0W7 228 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 DHX33Q9H6R0 707 aaKnown RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A7Q9HAW7 530 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A10Q9HAW8 530 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 UGT1A8Q9HAW9 530 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 C12orf10Q9HB07 376 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 C6orf50Q9HD87 102 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 SLAMF7Q9NQ25 335 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 C8orf4Q9NR00 106 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 BLOC1S4Q9NUP1 217 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 SEPT11Q9NVA2 429 aaKnown RBP5.46□□□□□ -1.54
CLK1-202ENST00000409403 RLIMQ9NVW2 624 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 HOXC10Q9NYD6 342 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 IL20Q9NYY1 176 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 SEPT10Q9P0V9 454 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 CFAP97Q9P2B7 532 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ANKMY1Q9P2S6 941 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ARHGAP26Q9UNA1 814 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 BPTFQ12830 3046 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 ZNF804BA4D1E1 1349 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 RALGAPA2Q2PPJ7 1873 aa5.46□□□□□ -1.54
CLK1-202ENST00000409403 EP300Q09472 2414 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 ILVBLA1L0T0 632 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 TRIM64BA6NI03 449 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 VWA5AO00534 786 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms