RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CCT8L2Q96SF2 557 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PTPN18Q99952 460 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 RACGAP1Q9H0H5 632 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SEMA4AQ9H3S1 761 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 NECTIN3Q9NQS3 549 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 ZDHHC3Q9NYG2 299 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 HMGXB4Q9UGU5 601 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PADI2Q9Y2J8 665 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM98Q9Y2Y6 226 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SNX13Q9Y5W8 968 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 ACTL7BQ9Y614 415 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 CLCA3PQ9Y6N3 262 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 FAM237BA0A1B0GVD1 139 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TSPAN6O43657 245 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 CNOT3O75175 753 aaKnown RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 EPCAMP16422 314 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 LARS2Q15031 903 aaKnown RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PRRT3Q5FWE3 981 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TBCELQ5QJ74 424 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SULT1C3Q6IMI6 304 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 DHFR2Q86XF0 187 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SIAH1Q8IUQ4 282 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 DENND6AQ8IWF6 608 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PCYT2Q99447 389 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SEPHS2Q99611 448 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM245Q9H330 911 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 LRRC19Q9H756 370 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM27Q9HBJ8 222 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 IGSF9Q9P2J2 1179 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TRPS1Q9UHF7 1281 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 CAB39Q9Y376 341 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 A0A1W2PP55 124 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PIRO00625 290 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 AZIN1O14977 448 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SNAP91O60641 907 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 FAM20BO75063 409 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 STK16O75716 305 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PPIBP23284 216 aaKnown RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 CST5P28325 142 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 GSTM5P46439 218 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 RAB33AQ14088 237 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TYW3Q6IPR3 259 aaKnown RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 ZCCHC23Q6ZST2 131 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 GPR180Q86V85 440 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 CAMK1DQ8IU85 385 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PARP9Q8IXQ6 854 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SAMD14Q8IZD0 417 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM156Q8N614 296 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PLD5Q8N7P1 536 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 DCAF4L2Q8NA75 395 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 RPLP0P6Q8NHW5 317 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 ITFG1Q8TB96 612 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SMPDL3BQ92485 455 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 PDLIM2Q96JY6 352 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 TBATAQ96M53 351 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 WDR92Q96MX6 357 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 SNX15Q9NRS6 342 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 INTS10Q9NVR2 710 aaKnown RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 CORO1CQ9ULV4 474 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-203ENST00000409101 COG5Q9UP83 839 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 LYVE1Q9Y5Y7 322 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 ARL5AQ9Y689 179 aa4.97□□□□□ -1.61
SCN3A-203ENST00000409101 IQCF5A8MTL0 148 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 A8MUA0 341 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 H3BQF6 201 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 CER1O95813 267 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 GSRP00390 522 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 ESR1P03372 595 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 EDNRBP24530 442 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 TARSP26639 723 aaKnown RBP4.96□□□□□ -1.61
SCN3A-203ENST00000409101 SERPINB3P29508 390 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 HNRNPH1P31943 449 aaKnown RBP4.96□□□□□ -1.61
SCN3A-203ENST00000409101 SCNN1AP37088 669 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 CLK1P49759 484 aaKnown RBP4.96□□□□□ -1.61
SCN3A-203ENST00000409101 CLCNKAP51800 687 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 CCNHP51946 323 aaPredicted RBP4.96□□□□□ -1.61
SCN3A-203ENST00000409101 DEFB103AP81534 67 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 MRPL28Q13084 256 aaKnown RBP4.96□□□□□ -1.61
SCN3A-203ENST00000409101 NR0B2Q15466 257 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 GPR33Q49SQ1 333 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 RNASEH2BQ5TBB1 312 aaKnown RBP4.96□□□□□ -1.61
SCN3A-203ENST00000409101 SYPL2Q5VXT5 272 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 CDC73Q6P1J9 531 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 DEF8Q6ZN54 512 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF567Q8N184 647 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 SPATA22Q8NHS9 363 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 DCAKDQ8WVC6 231 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 BAP1Q92560 729 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 OLFM3Q96PB7 478 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 PANX1Q96RD7 426 aa4.96□□□□□ -1.61
SCN3A-203ENST00000409101 WWP2O00308 870 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 KHNYNO15037 678 aaKnown RBP4.96□□□□□ -1.62
SCN3A-203ENST00000409101 AXIN1O15169 862 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 PI15O43692 258 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 JUNDP17535 347 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 OGNP20774 298 aaKnown RBP4.96□□□□□ -1.62
SCN3A-203ENST00000409101 CCND1P24385 295 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 LRPAP1P30533 357 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 VIPR2P41587 438 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms