RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 PLPP6Q8IY26 295 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 RYBPQ8N488 228 aaPredicted RBP16.77■□□□□ 0.27
HOXA10-202ENST00000396344 SPEM1Q8N4L4 309 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 FAM13CQ8NE31 585 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 PIH1D2Q8WWB5 315 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 NELL1Q92832 810 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 UTP4Q969X6 686 aaKnown RBP16.77■□□□□ 0.27
HOXA10-202ENST00000396344 LYSMD1Q96S90 227 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 ERVK-6Q9BXR3 956 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 CADM1Q9BY67 442 aaKnown RBP16.77■□□□□ 0.27
HOXA10-202ENST00000396344 EBF3Q9H4W6 596 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 ZFYVE1Q9HBF4 777 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 DUS2Q9NX74 493 aaKnown RBP16.77■□□□□ 0.27
HOXA10-202ENST00000396344 TAS2R1Q9NYW7 299 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 GNPTGQ9UJJ9 305 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 SLC8A2Q9UPR5 921 aa16.77■□□□□ 0.27
HOXA10-202ENST00000396344 GPR179Q6PRD1 2367 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 GFRA3O60609 400 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 FMO4P31512 558 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 CCR3P51677 355 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 RAP1GDS1P52306 607 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 KDSRQ06136 332 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 MTAPQ13126 283 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 CCINQ13939 588 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 UBAP2LQ14157 1087 aaKnown RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PTPRCAPQ14761 206 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 MAPRE2Q15555 327 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 CRY1Q16526 586 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PTPRNQ16849 979 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 EML3Q32P44 896 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 GPR33Q49SQ1 333 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 RINLQ6ZS11 566 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PIM3Q86V86 326 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 RBFAQ8N0V3 343 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 CBARPQ8N350 705 aaPredicted RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 CPSF7Q8N684 471 aaKnown RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 ANKRD49Q8WVL7 239 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 SGF29Q96ES7 293 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PRR11Q96HE9 360 aaPredicted RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 NSMCE3Q96MG7 304 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 ZNF641Q96N77 438 aaPredicted RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 CPEB1Q9BZB8 566 aaKnown RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PFDN4Q9NQP4 134 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 MARK1Q9P0L2 795 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 EVLQ9UI08 416 aaPredicted RBP16.76■□□□□ 0.27
HOXA10-202ENST00000396344 RNF112Q9ULX5 631 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PCDHGA2Q9Y5H1 932 aa16.76■□□□□ 0.27
HOXA10-202ENST00000396344 PRR23AA6NEV1 266 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 PRMT5O14744 637 aaPredicted RBP16.75■□□□□ 0.27
HOXA10-202ENST00000396344 SCAMP3O14828 347 aaKnown RBP16.75■□□□□ 0.27
HOXA10-202ENST00000396344 NFATC1O95644 943 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 THRAP10827 490 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 ARSAP15289 507 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 CD70P32970 193 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 RECQLP46063 649 aaPredicted RBP16.75■□□□□ 0.27
HOXA10-202ENST00000396344 IL2P60568 153 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 PEX6Q13608 980 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 SLC9B1Q4ZJI4 515 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 TMEM196Q5HYL7 178 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 ZNF678Q5SXM1 525 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 TAS2R42Q7RTR8 314 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 LYSMD3Q7Z3D4 306 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 SNX20Q7Z614 316 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 LSMEM2Q8N112 164 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 SPATA6LQ8N4H0 392 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 CEP70Q8NHQ1 597 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 STMN2Q93045 179 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 BHMTQ93088 406 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 LMLNQ96KR4 655 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 MIPEPQ99797 713 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 CLPBQ9H078 707 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 ZDHHC2Q9UIJ5 367 aa16.75■□□□□ 0.27
HOXA10-202ENST00000396344 STX16-NPEPL1H3BU86 382 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 STX16O14662 325 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 GRID2O43424 1007 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 ZBTB14O43829 449 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 PABPC1P11940 636 aaKnown RBP16.74■□□□□ 0.27
HOXA10-202ENST00000396344 SRCP12931 536 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 GFAPP14136 432 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 SPAM1P38567 509 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 RGS4P49798 205 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 INHBCP55103 352 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 POLR2LP62875 67 aaKnown RBP16.74■□□□□ 0.27
HOXA10-202ENST00000396344 GRSF1Q12849 480 aaKnown RBP eCLIP16.74■□□□□ 0.27
HOXA10-202ENST00000396344 CDC16Q13042 620 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 NAA25Q14CX7 972 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 PON2Q15165 354 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 TRMT5Q32P41 509 aaKnown RBP16.74■□□□□ 0.27
HOXA10-202ENST00000396344 TRIM68Q6AZZ1 485 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
HOXA10-202ENST00000396344 CUZD1Q86UP6 607 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 AHI1Q8N157 1196 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 KDM1BQ8NB78 822 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 GRIN3AQ8TCU5 1115 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 ACTRT2Q8TDY3 377 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 MAELQ96JY0 434 aaKnown RBP16.74■□□□□ 0.27
HOXA10-202ENST00000396344 ANKRD27Q96NW4 1050 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 BBS2Q9BXC9 721 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 NUF2Q9BZD4 464 aa16.74■□□□□ 0.27
HOXA10-202ENST00000396344 CYP4F12Q9HCS2 524 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms