RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 CLEC6AQ6EIG7 209 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 PYROXD2Q8N2H3 581 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 ARL10Q8N8L6 244 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 GATA5Q9BWX5 397 aaPredicted RBP17.22■□□□□ 0.35
UBFD1-201ENST00000395878 GALNT8Q9NY28 637 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 MRTO4Q9UKD2 239 aaKnown RBP17.22■□□□□ 0.35
UBFD1-201ENST00000395878 IDH3BO43837 385 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 KHDRBS3O75525 346 aaKnown RBP17.22■□□□□ 0.35
UBFD1-201ENST00000395878 IL10RBQ08334 325 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 GTF2H2Q13888 395 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 GTF2H2CQ6P1K8 395 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 RFWD3Q6PCD5 774 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 GRHL1Q9NZI5 618 aa17.22■□□□□ 0.35
UBFD1-201ENST00000395878 IGKV6D-41A0A0C4DH26 115 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 FADS2O95864 444 aaKnown RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 NMBRP28336 390 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 MYBPC1Q00872 1141 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 TRIM32Q13049 653 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 ALG2Q9H553 416 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 TRMT13Q9NUP7 481 aaKnown RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 COQ4Q9Y3A0 265 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 PMM2O15305 246 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 TLL1O43897 1013 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 AQP1P29972 269 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 NAE1Q13564 534 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 LDB1Q86U70 411 aaPredicted RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 BANPQ8N9N5 519 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 CENPNQ96H22 339 aaPredicted RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 FAM83DQ9H4H8 585 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 DENND2DQ9H6A0 471 aaPredicted RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 FBXW11Q9UKB1 542 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 IRAK3Q9Y616 596 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 SLC7A4O43246 635 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 OR5F1O95221 314 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 PRNPP04156 253 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 PNLIPRP1P54315 467 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 ESRP1Q6NXG1 681 aaKnown RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 OAFQ86UD1 273 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 HMCESQ96FZ2 354 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 NTPCRQ9BSD7 190 aaKnown RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 NUSAP1Q9BXS6 441 aaKnown RBP17.21■□□□□ 0.35
UBFD1-201ENST00000395878 SIX2Q9NPC8 291 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 CNTN6Q9UQ52 1028 aa17.21■□□□□ 0.35
UBFD1-201ENST00000395878 MCIDASD6RGH6 385 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 ANXA4P09525 319 aaPredicted RBP17.21■□□□□ 0.34
UBFD1-201ENST00000395878 UNGP13051 313 aaPredicted RBP17.21■□□□□ 0.34
UBFD1-201ENST00000395878 CDH3P22223 829 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 IGFBP4P22692 258 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 RPS9P46781 194 aaKnown RBP17.21■□□□□ 0.34
UBFD1-201ENST00000395878 HSPA7P48741 367 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 ZNF132P52740 706 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 PTPN5P54829 565 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 C2orf80Q0P641 193 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 SULT1C3Q6IMI6 304 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 ZNF781Q8N8C0 355 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 VANGL1Q8TAA9 524 aaPredicted RBP17.21■□□□□ 0.34
UBFD1-201ENST00000395878 GIPC3Q8TF64 312 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 PIGUQ9H490 435 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 NMUR1Q9HB89 426 aa17.21■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3DA0A087WVF3 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3IA0A087WXS9 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3EA0A087X179 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3KA0A087X1G2 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3FA6NER0 549 aaPredicted RBP17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3LB9A6J9 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 CASKO14936 926 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 GOT2P00505 430 aaKnown RBP17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3HP0C7X1 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 IDSP22304 550 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 ACTR3P61158 418 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 HKDC1Q2TB90 917 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TCEAL5Q5H9L2 206 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3GQ6DHY5 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3CQ6IPX1 549 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TMPRSS11AQ6ZMR5 421 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 BEND5Q7L4P6 421 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TBC1D3Q8IZP1 549 aaPredicted RBP17.2■□□□□ 0.34
UBFD1-201ENST00000395878 MYOCQ99972 504 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 ZFP37Q9Y6Q3 630 aaPredicted RBP17.2■□□□□ 0.34
UBFD1-201ENST00000395878 ABHD14A-ACY1A0A1B0GW23 586 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 BTBD19C9JJ37 291 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 SCN2BO60939 215 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 ESR1P03372 595 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 SPATA31D3P0C874 917 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 LPIN1Q14693 890 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 ATG14Q6ZNE5 492 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 SPATA31D4Q6ZUB0 917 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 CHST9Q7L1S5 443 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 PARGQ86W56 976 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 PARP8Q8N3A8 854 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 CPA6Q8N4T0 437 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 C11orf65Q8NCR3 313 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 PCDH19Q8TAB3 1148 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 MIR1-1HGQ9H1L0 117 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 ACSS2Q9NR19 701 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TNFRSF11BO00300 401 aa17.2■□□□□ 0.34
UBFD1-201ENST00000395878 TEX28O15482 410 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms