RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ANKFN1Q8N957 763 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 GPR150Q8NGU9 434 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 TFAP2CQ92754 450 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 TOP1MTQ969P6 601 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 TCF12Q99081 682 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CWH43Q9H720 699 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 CHD5Q8TDI0 1954 aa13.36□□□□□ -0.27
GTF2F1-201ENST00000394456 ANKRD33BA6NCL7 494 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 F5H5T6 163 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CBX4O00257 560 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CLGNO14967 610 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ACOX3O15254 700 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 C1RP00736 705 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 KLKB1P03952 638 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 IRF1P10914 325 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CDK4P11802 303 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ATP5C1P36542 298 aaKnown RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ARL1P40616 181 aaPredicted RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 PIK3CGP48736 1102 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CREB5Q02930 508 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 GNA12Q03113 381 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 RING1Q06587 406 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CYP51A1Q16850 503 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 TYSND1Q2T9J0 566 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 SLC8B1Q6J4K2 584 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 SLC39A5Q6ZMH5 540 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ARHGAP22Q7Z5H3 698 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 B4GALNT2Q8NHY0 566 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CYGBQ8WWM9 190 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ROPN1LQ96C74 230 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 DUS3LQ96G46 650 aaKnown RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 RMND5BQ96G75 393 aaPredicted RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 IGSF21Q96ID5 467 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 TFB2MQ9H5Q4 396 aaKnown RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 LTB4R2Q9NPC1 389 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 FNIP2Q9P278 1114 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 EBF1Q9UH73 591 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 PCTPQ9UKL6 214 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 H3BNC9 293 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 EI24O14681 340 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 SNAP91O60641 907 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 NDUFS3O75489 264 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 BMP2P12643 396 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 OR4D2P58180 307 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 LIPEQ05469 1076 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 SMARCB1Q12824 385 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 PABPC1LQ4VXU2 614 aaKnown RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ZBTB46Q86UZ6 589 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 AUTS2Q8WXX7 1259 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 EZH1Q92800 747 aaPredicted RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 HGH1Q9BTY7 390 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 AGPAT4Q9NRZ5 378 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ARMC1Q9NVT9 282 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 NLE1Q9NVX2 485 aaPredicted RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 DNMT3LQ9UJW3 386 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 MYRFQ9Y2G1 1151 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ZFC3H1O60293 1989 aaKnown RBP13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
GTF2F1-201ENST00000394456 COCHO43405 550 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 KATNA1O75449 491 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 RSL1D1O76021 490 aaKnown RBP13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 CYBBP04839 570 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 RPS17P08708 135 aaKnown RBP13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 CALRP27797 417 aaKnown RBP13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 SLC26A3P40879 764 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 DGKQP52824 942 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 MAP7Q14244 749 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ANKS6Q68DC2 871 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 OR6K2Q8NGY2 324 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 RIN3Q8TB24 985 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 STAG3L4Q8TBR4 150 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 LINGO1Q96FE5 620 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 RPF2Q9H7B2 306 aaKnown RBP13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 RNF103-CHMP3A0A140T963 221 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ZNF840PA6NDX5 716 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 B4GAT1O43505 415 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 HSPA8P11142 646 aaKnown RBP13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ZNF23P17027 643 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 MC4RP32245 332 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 GGT5P36269 586 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ALDH3B2P48448 385 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 MAPK10P53779 464 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ATP6V0D1P61421 351 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 SEMG2Q02383 582 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 PLD1Q13393 1074 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 PLCL1Q15111 1095 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 ZRANB3Q5FWF4 1079 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 LETMD1Q6P1Q0 360 aa13.34□□□□□ -0.27
GTF2F1-201ENST00000394456 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms