RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 HEMK1Q9Y5R4 338 aaPredicted RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 SZT2Q5T011 3432 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 DOCK6Q96HP0 2047 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 FFAR3O14843 346 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 GPR42O15529 346 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 CACNG3O60359 315 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 NDST3O95803 873 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ZDHHC11BP0C7U3 371 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 PSMA4P25789 261 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ADSLP30566 484 aaPredicted RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 HOXC13P31276 330 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 SLC6A4P31645 630 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 GGT5P36269 586 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 POLD2P49005 469 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 MAPK10P53779 464 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 DNAJB13P59910 316 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 XIAPP98170 497 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 INPP5AQ14642 412 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 PLA2G4EQ3MJ16 856 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 PTRHD1Q6GMV3 140 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 UGT2A3Q6UWM9 527 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 CBR4Q8N4T8 237 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 TMCO5AQ8N6Q1 288 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 SLC35B4Q969S0 331 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 SLC22A12Q96S37 553 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 LIN28AQ9H9Z2 209 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 YIPF1Q9Y548 306 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 BACE2Q9Y5Z0 518 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 PFDN6O15212 129 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 GMNNO75496 209 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ECI2O75521 394 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ABLIM3O94929 683 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 KLKB1P03952 638 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ATXN1LP0C7T5 689 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 COL4A6Q14031 1691 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 HERC3Q15034 1050 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 PARP15Q460N3 678 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 RNF219Q5W0B1 726 aaPredicted RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 RETREG3Q86VR2 466 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 DNAJC5GQ8N7S2 189 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ZBTB8BQ8NAP8 495 aaPredicted RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 METTL6Q8TCB7 284 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 GRIN3AQ8TCU5 1115 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 ARMC5Q96C12 935 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 MEAF6Q9HAF1 191 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 RC3H2Q9HBD1 1191 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 MRM3Q9HC36 420 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 DNMT3LQ9UJW3 386 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 AGO1Q9UL18 857 aaKnown RBP11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
CAPRIN1-202ENST00000389645 NUP214P35658 2090 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 REV3LO60673 3130 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 DHRS12A0PJE2 317 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 TEX28O15482 410 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 OR4F21O95013 312 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 PEX11BO96011 259 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 URODP06132 367 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 ZNF23P17027 643 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 ADARP55265 1226 aaKnown RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 NR6A1Q15406 480 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 ATXN7L2Q5T6C5 722 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 GPSM1Q86YR5 675 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 PPM1MQ96MI6 270 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 MCMBPQ9BTE3 642 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 GID8Q9NWU2 228 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 CNOT6Q9ULM6 557 aaKnown RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 E2F6O75461 281 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 CAPN3P20807 821 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 HTR7P34969 479 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 PSMD7P51665 324 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 SGSHP51688 502 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 STC1P52823 247 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 RHDQ02161 417 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 SMARCB1Q12824 385 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 IL27RAQ6UWB1 636 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 DNAJB7Q7Z6W7 309 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 OFCC1Q8IZS5 231 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 PDZD8Q8NEN9 1154 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 NUDT8Q8WV74 236 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 TRMOQ9BU70 441 aa11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 SOX17Q9H6I2 414 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 OLA1Q9NTK5 396 aaKnown RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 COL4A4P53420 1690 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-202ENST00000389645 ATP6V1B2P21281 511 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 CORO1AP31146 461 aaKnown RBP11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 RHOAP61586 193 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 IL1RL1Q01638 556 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 CREB5Q02930 508 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 LRP8Q14114 963 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 ZIK1Q3SY52 487 aaPredicted RBP11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 HECTD3Q5T447 861 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 PSAPL1Q6NUJ1 521 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 TTC33Q6PID6 262 aaPredicted RBP11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 FAM151BQ6UXP7 276 aa11.96□□□□□ -0.49
CAPRIN1-202ENST00000389645 SPRED2Q7Z698 418 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms