RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 H0YAE9 185 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 MSI1O43347 362 aaKnown RBP11□□□□□ -0.65
CCDC40-203ENST00000374877 ABCB7O75027 752 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 PAGE1O75459 146 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 S1PR4O95977 384 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 CD1DP15813 335 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 RPL9P32969 192 aaKnown RBP11□□□□□ -0.65
CCDC40-203ENST00000374877 IDUAP35475 653 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 PLA2G16P53816 162 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 RAD23AP54725 363 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 OR4D2P58180 307 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 UFM1P61960 85 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 OCA2Q04671 838 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
CCDC40-203ENST00000374877 XAF1Q6GPH4 301 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 SLC24A5Q71RS6 500 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 ABHD11Q8NFV4 315 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 ASB2Q96Q27 587 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 CATSPERBQ9H7T0 1116 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 LTB4R2Q9NPC1 389 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 POLR3BQ9NW08 1133 aaPredicted RBP11□□□□□ -0.65
CCDC40-203ENST00000374877 NUDT5Q9UKK9 219 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 ST14Q9Y5Y6 855 aa11□□□□□ -0.65
CCDC40-203ENST00000374877 ASPDHA6ND91 283 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 KPNA4O00629 521 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 GABRDO14764 452 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 C1RP00736 705 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 MYCP01106 439 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 CYBBP04839 570 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 THP07101 528 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 FGF4P08620 206 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 THRBP10828 461 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 KPNA1P52294 538 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 LBX1P52954 281 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 PLIN5Q00G26 463 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 YWHAHQ04917 246 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 POLD3Q15054 466 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 C1QTNF12Q5T7M4 302 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 GLYATQ6IB77 296 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 BHLHA9Q7RTU4 235 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 PTRH1Q86Y79 214 aaKnown RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 PDPRQ8NCN5 879 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 SLC35B4Q969S0 331 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 TMBIM1Q969X1 311 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 CNDP2Q96KP4 475 aaKnown RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 FCRL2Q96LA5 508 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 KLHL5Q96PQ7 755 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 GAD1Q99259 594 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 MUC13Q9H3R2 512 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 ELAC1Q9H777 363 aaKnown RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 SUN2Q9UH99 717 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 PCDHGA11Q9Y5H2 935 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 GPR45Q9Y5Y3 372 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 KRBA1A5PL33 1030 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 TMEM247A6NEH6 219 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 TOR1BO14657 336 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 TCF3P15923 654 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 HRH2P25021 359 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 HOXD12P35452 270 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 NFKB2Q00653 900 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 DAG1Q14118 895 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 SPCS2Q15005 226 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 RAB41Q5JT25 222 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 TIGD7Q6NT04 549 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 CRTC3Q6UUV7 619 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 THAP5Q7Z6K1 395 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 SNX29P2Q8IUI4 249 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 C8orf59Q8N0T1 100 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-203ENST00000374877 LEMD2Q8NC56 503 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 TBATAQ96M53 351 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 PPP1R2P1Q96PQ5 205 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 CCDC90BQ9GZT6 254 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 GMIPQ9P107 970 aa10.99□□□□□ -0.65
CCDC40-203ENST00000374877 HTR3EA5X5Y0 456 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NCF1BA6NI72 391 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NCF1CA8MVU1 366 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 H0Y858 1186 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 PQBP1O60828 265 aaKnown RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 XYLBO75191 536 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 DEAF1O75398 565 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 CXCL10P02778 98 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NCF1P14598 390 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NFKBIAP25963 317 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 ALDH3A2P51648 485 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 CLCQ05315 142 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 RCAN2Q14206 197 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 PTPRCAPQ14761 206 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 KDELC1Q6UW63 502 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 UROC1Q96N76 676 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 HEPHQ9BQS7 1158 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 GPN2Q9H9Y4 310 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 TLR9Q9NR96 1032 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 LEF1Q9UJU2 399 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NEU3Q9UQ49 428 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 CLDN25C9JDP6 229 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SLC7A4O43246 635 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NBNO60934 754 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms