RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 CACNB3P54284 484 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 GRM3Q14832 879 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 USF2Q15853 346 aaPredicted RBP10.17□□□□□ -0.78
CD28-202ENST00000374481 TAF8Q7Z7C8 310 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 MFSD2AQ8NA29 543 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 OR13F1Q8NGS4 319 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 PABPC5Q96DU9 382 aaKnown RBP10.17□□□□□ -0.78
CD28-202ENST00000374481 SP110Q9HB58 689 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 LATS2Q9NRM7 1088 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 ERVK-18Q9QC07 812 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 COMMD3Q9UBI1 195 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 UBQLN1Q9UMX0 589 aaKnown RBP10.17□□□□□ -0.78
CD28-202ENST00000374481 HCN4Q9Y3Q4 1203 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 SYNDIG1LA6NDD5 238 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 FAM220BPB1ANY3 271 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 E9PAM4 449 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 INMT-MINDY4F8WBC2 141 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 NR2F6P10588 404 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 CPB1P15086 417 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 HDCP19113 662 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 KELP23276 732 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 CAPZA2P47755 286 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 POLR2JP52435 117 aaKnown RBP10.17□□□□□ -0.78
CD28-202ENST00000374481 CLCA4Q14CN2 919 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 CRY1Q16526 586 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 FAM187BQ17R55 369 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 INAVAQ3KP66 663 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 PGBD2Q6P3X8 592 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 IL27RAQ6UWB1 636 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.17□□□□□ -0.78
CD28-202ENST00000374481 TIFABQ6ZNK6 161 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 PLD5Q8N7P1 536 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 TEX47Q8TBZ9 253 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 CCDC32Q9BV29 185 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 RGS18Q9NS28 235 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
CD28-202ENST00000374481 ELOVL7A1L3X0 281 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 AGAP5A6NIR3 686 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 NPHS1O60500 1241 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 PEX14O75381 377 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 DDCP20711 480 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 S100A3P33764 101 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 ERVK-8P63133 956 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 PCDH1Q08174 1060 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 DOK7Q18PE1 504 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 FAM182AQ5T1J6 154 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 FAM117BQ6P1L5 589 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 HAGHLQ6PII5 290 aaPredicted RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 CMTR2Q8IYT2 770 aaKnown RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 METTL4Q8N3J2 472 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 ANGPTL6Q8NI99 470 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 SGTBQ96EQ0 304 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 CRELD1Q96HD1 420 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 Q96MT0 163 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 RDH12Q96NR8 316 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 LGMNQ99538 433 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 TM9SF2Q99805 663 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 SNRNP25Q9BV90 132 aaKnown RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 CYP3A43Q9HB55 503 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 PRG3Q9Y2Y8 225 aaPredicted RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 MT-ND2P03891 347 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 ADORA2AP29274 412 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 RFC2P35250 354 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 PGDP52209 483 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 NDST1P52848 882 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 GABARAPL2P60520 117 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 MAD2L1Q13257 205 aaPredicted RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 NFE2L1Q14494 772 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 ATP6AP1Q15904 470 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 LRIT3Q3SXY7 679 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 FBXO43Q4G163 708 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 SPATC1Q76KD6 591 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 ZNF438Q7Z4V0 828 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 MILR1Q7Z6M3 343 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 LDHDQ86WU2 507 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 MAP4K3Q8IVH8 894 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 NANOGQ9H9S0 305 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 HCN3Q9P1Z3 774 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 TMEM181Q9P2C4 612 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 RIMKLBQ9ULI2 386 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 MAU2Q9Y6X3 613 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 E7ESA3 106 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 M0QYT0 321 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 DNAJB2P25686 324 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 EEFSECP57772 596 aaKnown RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 PFKPQ01813 784 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 TEX44Q53QW1 395 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 XKR3Q5GH77 459 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 DET1Q7L5Y6 550 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 CHCHD4Q8N4Q1 142 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 VGLL2Q8N8G2 317 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 RNF149Q8NC42 400 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 SLC7A14Q8TBB6 771 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 CNIH3Q8TBE1 160 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 RNF139Q8WU17 664 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 TESCQ96BS2 214 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 PTERQ96BW5 349 aa10.16□□□□□ -0.78
CD28-202ENST00000374481 MAGEB10Q96LZ2 347 aaPredicted RBP10.16□□□□□ -0.78
CD28-202ENST00000374481 C17orf62Q9BQA9 187 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms