RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 DPH1Q9BZG8 443 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 UGT1A7Q9HAW7 530 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 UGT1A10Q9HAW8 530 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 UGT1A8Q9HAW9 530 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 SPATS2LQ9NUQ6 558 aaKnown RBP14.29□□□□□ -0.12
EDF1-202ENST00000371648 TAAR2Q9P1P5 351 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 APPL1Q9UKG1 709 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 SNX12Q9UMY4 172 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 PLEKHM1Q9Y4G2 1056 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 GCN1Q92616 2671 aaKnown RBP14.29□□□□□ -0.12
EDF1-202ENST00000371648 RP1P56715 2156 aa14.29□□□□□ -0.12
EDF1-202ENST00000371648 GOLGA6L10A0A0M3HER8 536 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 ZNF185O15231 689 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 KALRNO60229 2985 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 NUAK1O60285 661 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 DNAJC6O75061 913 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 MTX2O75431 263 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 CDK14O94921 469 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 ZNF8P17098 575 aaPredicted RBP14.28□□□□□ -0.12
EDF1-202ENST00000371648 TCP1P17987 556 aaKnown RBP14.28□□□□□ -0.12
EDF1-202ENST00000371648 HADHAP40939 763 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 PDX1P52945 283 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 TERF1P54274 439 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 CCL7P80098 99 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 BASP1P80723 227 aaKnown RBP14.28□□□□□ -0.12
EDF1-202ENST00000371648 GTF2H3Q13889 308 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 POU6F1Q14863 301 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
EDF1-202ENST00000371648 ADGRG6Q86SQ4 1221 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 ARL14Q8N4G2 192 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 GLIS1Q8NBF1 620 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 ZDHHC1Q8WTX9 485 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 VPS35Q96QK1 796 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 ASB8Q9H765 288 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 WDR70Q9NW82 654 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 FKBPLQ9UIM3 349 aa14.28□□□□□ -0.12
EDF1-202ENST00000371648 TTC7AQ9ULT0 858 aaPredicted RBP14.28□□□□□ -0.12
EDF1-202ENST00000371648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
EDF1-202ENST00000371648 ARHGEF17Q96PE2 2063 aaPredicted RBP14.27□□□□□ -0.12
EDF1-202ENST00000371648 TRBV23OR9-2A0A075B6M9 112 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 CCDC187A0A096LP49 1063 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 CDRT15L2A8MXV6 281 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 NTN3O00634 580 aaPredicted RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 VEGFDO43915 354 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 SNX2O60749 519 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 SRP72O76094 671 aaKnown RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 ZIC2O95409 532 aaPredicted RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 PRAMEF1O95521 474 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 KRT14P02533 472 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 RPLP0P05388 317 aaKnown RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 ACP5P13686 325 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 VPS41P49754 854 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 CFHR1Q03591 330 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 CDH17Q12864 832 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 TMEM115Q12893 351 aaPredicted RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 SEMA5AQ13591 1074 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 LRP8Q14114 963 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 LDLRAP1Q5SW96 308 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 OGFOD3Q6PK18 319 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 CRTC3Q6UUV7 619 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 B3GNT8Q7Z7M8 397 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 NRROSQ86YC3 692 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 ZNF843Q8N446 348 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 Q8N9G6 341 aaPredicted RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 OR6C4Q8NGE1 309 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 OR13C4Q8NGS5 318 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 DTX3LQ8TDB6 740 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 NAPGQ99747 312 aaPredicted RBP14.27□□□□□ -0.13
EDF1-202ENST00000371648 FOXP3Q9BZS1 431 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 EPB41L5Q9HCM4 733 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 SMARCAL1Q9NZC9 954 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 SLC30A1Q9Y6M5 507 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 SCN8AQ9UQD0 1980 aa14.27□□□□□ -0.13
EDF1-202ENST00000371648 CCDC78A2IDD5 438 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 CTAGE9A4FU28 777 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 GPR89AB7ZAQ6 455 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 ERVH48-1M5A8F1 160 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 CES2O00748 559 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 KMOO15229 486 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 LDB2O43679 373 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 GPR89BP0CG08 455 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 MSH3P20585 1137 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 AKT1P31749 480 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 COILP38432 576 aaPredicted RBP14.26□□□□□ -0.13
EDF1-202ENST00000371648 RHDQ02161 417 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 VAC14Q08AM6 782 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 MSLNQ13421 630 aaPredicted RBP14.26□□□□□ -0.13
EDF1-202ENST00000371648 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 INSCQ1MX18 579 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 C14orf28Q4W4Y0 310 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 CCDC38Q502W7 563 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 CCDC137Q6PK04 289 aaKnown RBP14.26□□□□□ -0.13
EDF1-202ENST00000371648 SFTPA2Q8IWL1 248 aa14.26□□□□□ -0.13
EDF1-202ENST00000371648 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms