RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 NEK3P51956 506 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CRADDP78560 199 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CBX1P83916 185 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 POU4F1Q01851 419 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 OLIG2Q13516 323 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 COL9A2Q14055 689 aaPredicted RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 MPP2Q14168 576 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 POU6F1Q14863 301 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 TMED2Q15363 201 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 DLG2Q15700 870 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 ZNF423Q2M1K9 1284 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 HSP90AA5PQ58FG0 334 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 RNF187Q5TA31 235 aaPredicted RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 MRNIPQ6NTE8 343 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CERS6Q6ZMG9 384 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CLEC14AQ86T13 490 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CTAGE3PQ8IX95 158 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 SRRM1Q8IYB3 904 aaKnown RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 TMIEQ8NEW7 156 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 OR2A12Q8NGT7 310 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 MDM1Q8TC05 714 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 RHBDD1Q8TEB9 315 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CKAP2Q8WWK9 683 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 ZNF778Q96MU6 729 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 ZNF317Q96PQ6 595 aaPredicted RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 APOL2Q9BQE5 337 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CENPHQ9H3R5 247 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 SUV39H2Q9H5I1 410 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 TM9SF3Q9HD45 589 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 RAD18Q9NS91 495 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 INTS9Q9NV88 658 aaKnown RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 INTS10Q9NVR2 710 aaKnown RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 NKIRAS1Q9NYS0 192 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CTNNAL1Q9UBT7 734 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 SERGEFQ9UGK8 458 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 FBXO5Q9UKT4 447 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 ANKRD6Q9Y2G4 727 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 FCF1Q9Y324 198 aaKnown RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 BPTFQ12830 3046 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 TRBV5-4A0A0C4DH59 114 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 A0A1W2PP55 124 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 TTC34A8MYJ7 566 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 H0Y8X5 98 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PSMD11O00231 422 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PLK4O00444 970 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PFDN6O15212 129 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 MID1O15344 667 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 GLRA3O75311 464 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 VAPBO95292 243 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 CER1O95813 267 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 AHSGP02765 367 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 APOA4P06727 396 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PDHA1P08559 390 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 ERVK-10P10266 1014 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 CHN1P15882 459 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 CRABP2P29373 138 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 SERPINB8P50452 374 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 CLDN6P56747 220 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 RAB15P59190 212 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 DCDC1P59894 354 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 SLC14A1Q13336 389 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 THOC5Q13769 683 aaKnown RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 EFTUD2Q15029 972 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNX27-201ENST00000368838 HNRNPA1L2Q32P51 320 aaKnown RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 GPR33Q49SQ1 333 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 AARS2Q5JTZ9 985 aaKnown RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 AFTPHQ6ULP2 937 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 LINGO4Q6UY18 593 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 CILP2Q8IUL8 1156 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 MMAAQ8IVH4 418 aaKnown RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 ADAMTS14Q8WXS8 1223 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 VPS39Q96JC1 886 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 RPL10LQ96L21 214 aaKnown RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 MAGEB18Q96M61 343 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 SLC6A18Q96N87 628 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 HEPHQ9BQS7 1158 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 C1QTNF2Q9BXJ5 285 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 ZDHHC5Q9C0B5 715 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 BTBD1Q9H0C5 482 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 EPN3Q9H201 632 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 FBRSQ9HAH7 460 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 KCTD5Q9NXV2 234 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 TBK1Q9UHD2 729 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 APPL1Q9UKG1 709 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 CHKBQ9Y259 395 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PLLPQ9Y342 182 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 PCDHGC4Q9Y5F7 938 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 FASNP49327 2511 aaKnown RBP8.73□□□□□ -1.01
SNX27-201ENST00000368838 IGSF10Q6WRI0 2623 aa8.73□□□□□ -1.01
SNX27-201ENST00000368838 COL5A1P20908 1838 aaPredicted RBP8.72□□□□□ -1.01
SNX27-201ENST00000368838 LRRK1Q38SD2 2015 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 A0A1W2PPM1 405 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 GMNCA6NCL1 334 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 K7ERQ8 282 aa8.72□□□□□ -1.01
SNX27-201ENST00000368838 WNT9AO14904 365 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms