RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FZD3Q9NPG1 666 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 C20orf96Q9NUD7 363 aaPredicted RBP9.92□□□□□ -0.82
TPM3-210ENST00000368530 SENP1Q9P0U3 644 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SLC25A13Q9UJS0 675 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 VPS28Q9UK41 221 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SOX13Q9UN79 622 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 ZCWPW2A0A1B0GU75 182 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 FAM237BA0A1B0GVD1 139 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 C1QTNF3-AMACRE9PGA6 284 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 GOLGA8TH3BQL2 631 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 USP1O94782 785 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SNRPAP09012 282 aaKnown RBP9.92□□□□□ -0.82
TPM3-210ENST00000368530 RGRP47804 291 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 CLDN2P57739 230 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 DMTNQ08495 405 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SF3A3Q12874 501 aaKnown RBP eCLIP9.92□□□□□ -0.82
TPM3-210ENST00000368530 FGL2Q14314 439 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SEL1L3Q68CR1 1132 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 FOXR1Q6PIV2 292 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 PACS1Q6VY07 963 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 MICALCLQ6ZW33 695 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SETD3Q86TU7 594 aaPredicted RBP9.92□□□□□ -0.82
TPM3-210ENST00000368530 BBS5Q8N3I7 341 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 IFT43Q96FT9 208 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 APOLD1Q96LR9 279 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 ZNF778Q96MU6 729 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 ZNF599Q96NL3 588 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 RETREG1Q9H6L5 497 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 ASCL3Q9NQ33 180 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 IARS2Q9NSE4 1012 aaKnown RBP9.92□□□□□ -0.82
TPM3-210ENST00000368530 ZFATQ9P243 1243 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 SEPT3Q9UH03 358 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 VPS51Q9UID3 782 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 ZNF180Q9UJW8 692 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 TCAF1Q9Y4C2 921 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 PSAT1Q9Y617 370 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 FAM169AQ9Y6X4 670 aa9.92□□□□□ -0.82
TPM3-210ENST00000368530 MAGEB16A2A368 324 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 POM121BA6NF01 834 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 NDUFAB1O14561 156 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SCAMP1O15126 338 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 FFAR2O15552 330 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 PRPF4O43172 522 aaKnown RBP eCLIP9.91□□□□□ -0.82
TPM3-210ENST00000368530 BNIP3LO60238 219 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 ZMPSTE24O75844 475 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 KRT38O76015 456 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 MPOP05164 745 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 VIMP08670 466 aaKnown RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 HNRNPA2B1P22626 353 aaKnown RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 LSSP48449 732 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SERPINB9P50453 376 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 CXADRP78310 365 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 FZD2Q14332 565 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 GALNT3Q14435 633 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 CYTH1Q15438 398 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SLC1A5Q15758 541 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SEPT7Q16181 437 aaKnown RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 HSP90AA5PQ58FG0 334 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 ZNF542PQ5EBM4 170 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 PCID2Q5JVF3 399 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SIRPB2Q5JXA9 342 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 LGSNQ5TDP6 509 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 HHATQ5VTY9 493 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 RANBP10Q6VN20 620 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 TMEM135Q86UB9 458 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 KCNMB4Q86W47 210 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 ZNF248Q8NDW4 579 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 ZNF473Q8WTR7 871 aaKnown RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 SNRNP27Q8WVK2 155 aaKnown RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 ATXN7L3BQ96GX2 97 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 ZNF578Q96N58 590 aaPredicted RBP9.91□□□□□ -0.82
TPM3-210ENST00000368530 CCT8L2Q96SF2 557 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 AGAP2Q99490 1192 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 KIFC1Q9BW19 673 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 HDAC8Q9BY41 377 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 NLGN3Q9NZ94 848 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 TXNDC16Q9P2K2 825 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SLC17A7Q9P2U7 560 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 SLC2A6Q9UGQ3 507 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 KLF15Q9UIH9 416 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 HS3ST3A1Q9Y663 406 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 WASF2Q9Y6W5 498 aa9.91□□□□□ -0.82
TPM3-210ENST00000368530 HMX2A2RU54 273 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 K7ESM1 405 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 KPNA3O00505 521 aaPredicted RBP9.9□□□□□ -0.82
TPM3-210ENST00000368530 RAD51BO15315 384 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 TYROBPO43914 113 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 TMCC1O94876 653 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 CD160O95971 181 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 GP1BAP07359 652 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 CCT5P48643 541 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 SCNN1BP51168 640 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 ERVPABLB-1P60509 514 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 ARF5P84085 180 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 DAB2P98082 770 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 CFHR1Q03591 330 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 NAB1Q13506 487 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms