RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 TBC1D31Q96DN5 1066 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 PTCD3Q96EY7 689 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 MED8Q96G25 268 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 LIN37Q96GY3 246 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 OXNAD1Q96HP4 312 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 TNIP3Q96KP6 325 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 NLRP4Q96MN2 994 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 ZNF560Q96MR9 790 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 PWWP2AQ96N64 755 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 NUDCD1Q96RS6 583 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 VAT1Q99536 393 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 TRIM62Q9BVG3 475 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 GTPBP2Q9BX10 602 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 TPSD1Q9BZJ3 242 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 VCX3BQ9H321 246 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 PDZD7Q9H5P4 517 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 CPNE5Q9HCH3 593 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 PCDH18Q9HCL0 1135 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 MLXIPLQ9NP71 852 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 SPATS2LQ9NUQ6 558 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 GDAP2Q9NXN4 497 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 NSMCE4AQ9NXX6 385 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 MOCS1Q9NZB8 636 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 STX18Q9P2W9 335 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 HEY2Q9UBP5 337 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 BCAP29Q9UHQ4 241 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 HAO1Q9UJM8 370 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 TSPAN16Q9UKR8 245 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 UBQLN1Q9UMX0 589 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 SLC8A2Q9UPR5 921 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 APOBEC2Q9Y235 224 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 STK38LQ9Y2H1 464 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 STAB1Q9NY15 2570 aa6.51□□□□□ -1.37
ECHDC1-202ENST00000368289 PTPRDP23468 1912 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 RP1L1Q8IWN7 2480 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 GOLGA8QA0A0J9YX86 632 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 BLACEA4D250 179 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 GOLGA8OA6NCC3 632 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 C22orf46C9J442 243 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 GOLGA8NF8WBI6 632 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SLC22A2O15244 555 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 KCNN4O15554 427 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TPD52L2O43399 206 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 DIAPH2O60879 1101 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 PEX11AO75192 247 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SNNO75324 88 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 CIB2O75838 187 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 EGFP01133 1207 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 CALCAP01258 141 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 CYBBP04839 570 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 APOA4P06727 396 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 BPGMP07738 259 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 MSL3P1P0C860 447 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 LCP1P13796 627 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 GJA1P17302 382 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 ARF4P18085 180 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 IL4RP24394 825 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 NDST1P52848 882 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 YWHAZP63104 245 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 DYNLT1P63172 113 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SEMG2Q02383 582 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 FCHO2Q0JRZ9 810 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 BST2Q10589 180 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 BLMHQ13867 455 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 KPNB1Q14974 876 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 PDK1Q15118 436 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TAF11Q15544 211 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SMAD1Q15797 465 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 ZBTB6Q15916 424 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SMTNL2Q2TAL5 461 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 CCDC153Q494R4 210 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TMEM196Q5HYL7 178 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 KCNT1Q5JUK3 1230 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 XP32Q5T750 250 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 GRTP1Q5TC63 336 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 IRGCQ6NXR0 463 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SLC27A1Q6PCB7 646 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 PAQR3Q6TCH7 311 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 FAM183BPQ6ZVS7 135 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 NET1Q7Z628 596 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 MRPL10Q7Z7H8 261 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 RALGPS2Q86X27 583 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SYT12Q8IV01 421 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 NAXDQ8IW45 347 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 GPR65Q8IYL9 337 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 NETO2Q8NC67 525 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 PPP4R1Q8TF05 950 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TFB1MQ8WVM0 346 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 HSPH1Q92598 858 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 STAMBPL1Q96FJ0 436 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 SIGLEC10Q96LC7 697 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 MAGEB10Q96LZ2 347 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 QKIQ96PU8 341 aaKnown RBP eCLIP6.5□□□□□ -1.373e-7■■■■□ 24.7
ECHDC1-202ENST00000368289 NR1H4Q96RI1 486 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 FAM118BQ9BPY3 351 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 PAAF1Q9BRP4 392 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 TMEM120AQ9BXJ8 343 aa6.5□□□□□ -1.37
ECHDC1-202ENST00000368289 NUSAP1Q9BXS6 441 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms