RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CBX2Q14781 532 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 EMC10Q5UCC4 262 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 UBE2R2Q712K3 238 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TTLQ8NG68 377 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZNF490Q9ULM2 529 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PCDHGA11Q9Y5H2 935 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 DAOAP59103 153 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 SP3Q02447 781 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MTAPQ13126 283 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 FBXO43Q4G163 708 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 FAM151BQ6UXP7 276 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 OR4A15Q8NGL6 344 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■□□□ 12.6
CDC42BPA-203ENST00000366766 BCO2Q9BYV7 579 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 GDAP2Q9NXN4 497 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 MRPS23Q9Y3D9 190 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 Q9Y3F1 56 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TCRBV7S2A1N4TA0A589 114 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZMPSTE24O75844 475 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 NTRK1P04629 796 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 IFNW1P05000 195 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 FABP3P05413 133 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TNNI3P19429 210 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 KCNJ11Q14654 390 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 NPAS2Q99743 824 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TRIT1Q9H3H1 467 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 SYNDIG1Q9H7V2 258 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 SEC14L3Q9UDX4 400 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ERVW-1Q9UQF0 538 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 POP4O95707 220 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 GCNT6Q5T4J0 391 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 C11orf74Q86VG3 221 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TSPEARQ8WU66 669 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 NAT14Q8WUY8 206 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZNF317Q96PQ6 595 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 DTLQ9NZJ0 730 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZIM2Q9NZV7 527 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 ABCG1P45844 678 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 TAF10Q12962 218 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 LDLRAP1Q5SW96 308 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 LINC00471Q8N535 108 aa11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 PHPT1Q9NRX4 125 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-203ENST00000366766 COL6A1P12109 1028 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 GATAD2AQ86YP4 633 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FAM20CQ8IXL6 584 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CPNE9Q8IYJ1 553 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CRYBG2Q8N1P7 616 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 EEF1AKMT1Q8WVE0 214 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 IPCEF1Q8WWN9 437 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 LIPEQ05469 1076 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 GTF2H2Q13888 395 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 GTF2H2CQ6P1K8 395 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CXorf40BQ96DE9 158 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 RERGLQ9H628 205 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 NOL6Q9H6R4 1146 aaKnown RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CHRAC1Q9NRG0 131 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 KNTC1P50748 2209 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FPGTO14772 594 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 RAP2AP10114 183 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TAS2R41P59536 307 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZDHHC24Q6UX98 284 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FIBCD1Q8N539 461 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 COPS5Q92905 334 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 LENG8Q96PV6 779 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 RAB11FIP5Q9BXF6 653 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 POMPQ9Y244 141 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CHRNGP07510 517 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 SELPP16109 830 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FAM84AQ96KN4 292 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 GATA5Q9BWX5 397 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 XPNPEP1Q9NQW7 623 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CKLFQ9UBR5 152 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 SH3GLB1Q9Y371 365 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 COLEC10Q9Y6Z7 277 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 C4AP0C0L4 1744 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 C4BP0C0L5 1744 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 A0A1W2PQH9 124 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TACR2P21452 398 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 IDH3AP50213 366 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 MAP1SQ66K74 1059 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 PTCHD4Q6ZW05 846 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TP53INP1Q96A56 240 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ITM2CQ9NQX7 267 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CLDN5O00501 218 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FAM189A1O60320 539 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 NBNO60934 754 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 EPOP01588 193 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FESP07332 822 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CNSTQ6PJW8 725 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 C16orf59Q7L2K0 433 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 LRRC17Q8N6Y2 441 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ELMO3Q96BJ8 720 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms