RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ARNTP27540 789 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GSTM2P28161 218 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 MAGEA6P43360 314 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GP2P55259 537 aaKnown RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 OR4D2P58180 307 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TTLL4Q14679 1199 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TSTD2Q5T7W7 516 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 CYP20A1Q6UW02 462 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 SLC16A12Q6ZSM3 486 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 CLEC14AQ86T13 490 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 DTX3Q8N9I9 347 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ZNF641Q96N77 438 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 UHRF1Q96T88 793 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 THUMPD3Q9BV44 507 aaKnown RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ZNF717Q9BY31 904 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ASB7Q9H672 318 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TOR4AQ9NXH8 423 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 OR12D3Q9UGF7 316 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 A0A1W2PQ72 361 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 A8MT66 165 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 FZD9O00144 591 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 IPO13O94829 963 aaKnown RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 CPNE6O95741 557 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 CAPNS1P04632 268 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GPIP06744 558 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 MATKP42679 507 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GNG2P59768 71 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 BNIP2Q12982 314 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TUBA3CQ13748 450 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 HIST2H2ACQ16777 129 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TTC23Q5W5X9 447 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 WSCD1Q658N2 575 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 NATD1Q8N6N6 113 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 MINDY2Q8NBR6 621 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 MYOCQ99972 504 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 SEMA4BQ9NPR2 832 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 INTS7Q9NVH2 962 aaKnown RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 TESMINQ9Y4I5 508 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 CD36P16671 472 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 EMX1Q04741 257 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 NPTX1Q15818 432 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 PFKFB4Q16877 469 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 CTU2Q2VPK5 515 aaKnown RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GTF2IRD2BQ6EKJ0 949 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 FAM45BPQ6NSW5 357 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ARMCX2Q7L311 632 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GTF2IRD2Q86UP8 949 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 GALNT13Q8IUC8 556 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ATPAF2Q8N5M1 289 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 FAM45AQ8TCE6 357 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 KHSRPQ92945 711 aaKnown RBP eCLIP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 NUAK2Q9H093 628 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 RERGLQ9H628 205 aa12.6□□□□□ -0.39
VAMP1-201ENST00000361716 ZBTB20Q9HC78 741 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-201ENST00000361716 EFCAB9A8MZ26 197 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 M0QX08 132 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 FAM20BO75063 409 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 HMBSP08397 361 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 HK2P52789 917 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CD83Q01151 205 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CDH17Q12864 832 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 SNX17Q15036 470 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ACAP2Q15057 778 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CTF1Q16619 201 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CELF3Q5SZQ8 465 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 LYSMD2Q8IV50 215 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 GOLM1Q8NBJ4 401 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 HDAC2Q92769 488 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 HOPXQ9BPY8 73 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 MRPL57Q9BQC6 102 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 DNAI2Q9GZS0 605 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 RBM22Q9NW64 420 aaKnown RBP eCLIP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ANKRD6Q9Y2G4 727 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CCDC154A6NI56 674 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 YJEFN3A6XGL0 299 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 TBKBP1A7MCY6 615 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 TSPAN9O75954 239 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CHRNA1P02708 482 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 POLR2EP19388 210 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 PPP5CP53041 499 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 DEFA1P59665 94 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 DEFA3P59666 94 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 SMN1Q16637 294 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 FAM98BQ52LJ0 330 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 AHSA2Q719I0 299 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 SPRED1Q7Z699 444 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CHDHQ8NE62 594 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 PPHLN1Q8NEY8 458 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 LGALS12Q96DT0 336 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ZFP42Q96MM3 310 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 GPR22Q99680 433 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms