RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ANKRD33BA6NCL7 494 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 SYNDIG1LA6NDD5 238 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 MGAT4DA6NG13 374 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 SLC22A2O15244 555 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 TSPAN9O75954 239 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 MSH3P20585 1137 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PRIM2P49643 509 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 DGCR6Q14129 220 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 NADK2Q4G0N4 442 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 TPD52L3Q96J77 140 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 FEM1CQ96JP0 617 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PPP3R2Q96LZ3 170 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 NSUN5Q96P11 429 aaKnown RBP12.15□□□□□ -0.46
COL20A1-201ENST00000358894 DYRK4Q9NR20 520 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 GNPTGQ9UJJ9 305 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 LY75O60449 1722 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 TSC22D2O75157 780 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 GGT5P36269 586 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 MAGEA3P43357 314 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 CDH15P55291 814 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 STARD3Q14849 445 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
COL20A1-201ENST00000358894 TTC30BQ8N4P2 665 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 RERGLQ9H628 205 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 POLR3BQ9NW08 1133 aaPredicted RBP12.15□□□□□ -0.46
COL20A1-201ENST00000358894 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 IQCF5A8MTL0 148 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 BCAS2O75934 225 aaPredicted RBP12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PRAMEF1O95521 474 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PSMB9P28065 219 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 MTPNP58546 118 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PFKPQ01813 784 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 ZNF33AQ06730 810 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 ZNF284Q2VY69 593 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 TECRLQ5HYJ1 363 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PIK3R6Q5UE93 754 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 OR52E6Q96RD3 313 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 IL12RB2Q99665 862 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 ZFYVE1Q9HBF4 777 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 PRKAG2Q9UGJ0 569 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
COL20A1-201ENST00000358894 A0A1B0GVM2 712 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 TCAF2A6NFQ2 919 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 NDUFB5O43674 189 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 SNAP91O60641 907 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 COQ9O75208 318 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 ECI2O75521 394 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 CST1P01037 141 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 JUNP05412 331 aaKnown RBP12.15□□□□□ -0.47
COL20A1-201ENST00000358894 FYNP06241 537 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 TFPTP0C1Z6 253 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 MAPK1P28482 360 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 IRF8Q02556 426 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 SMYD5Q6GMV2 418 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 BPIFB6Q8NFQ5 453 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 SPPL2AQ8TCT8 520 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 MCOLN3Q8TDD5 553 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 MYO19Q96H55 970 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 YIPF2Q9BWQ6 316 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 ROGDIQ9GZN7 287 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 TNKS2Q9H2K2 1166 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 CNOT6Q9ULM6 557 aaKnown RBP12.15□□□□□ -0.47
COL20A1-201ENST00000358894 PHF24Q9UPV7 400 aa12.15□□□□□ -0.47
COL20A1-201ENST00000358894 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SYN3O14994 580 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SERPINI2O75830 405 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ZBTB11O95625 1053 aaPredicted RBP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 OR56A5P0C7T3 313 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 PM20D1Q6GTS8 502 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SYTL1Q8IYJ3 562 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SCML2Q9UQR0 700 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 H3BSA7 217 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 MAGEB3O15480 346 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 GRID2O43424 1007 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 WDR47O94967 919 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 PENKP01210 267 aaPredicted RBP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 OGNP20774 298 aaKnown RBP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SLC7A1P30825 629 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 DIO3P55073 304 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 CDH4P55283 916 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SPDYE7PQ495Y7 208 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM53Q6P2H8 277 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM26Q6ZUK4 368 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SERINC5Q86VE9 423 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SYT12Q8IV01 421 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 C8orf59Q8N0T1 100 aaPredicted RBP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 RBFAQ8N0V3 343 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 TTC9BQ8N6N2 239 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 KDM1BQ8NB78 822 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ROPN1LQ96C74 230 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 HPS4Q9NQG7 708 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ABCB10Q9NRK6 738 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM161AQ9NX61 479 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 Q9Y3F1 56 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 GMEB1Q9Y692 573 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms