RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EBF1Q9UH73 591 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 MUTYHQ9UIF7 546 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 KLF11O14901 512 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 KLHL2O95198 593 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 CCDC166P0CW27 439 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 NSG1P42857 185 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 TPMTP51580 245 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 DGKEP52429 567 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 TMEM259Q4ZIN3 620 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 CPLX4Q7Z7G2 160 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 KBTBD6Q86V97 674 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 PLA2G15Q8NCC3 412 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 ASB2Q96Q27 587 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 UNKQ9C0B0 810 aaKnown RBP17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 NSRP1Q9H0G5 558 aaKnown RBP17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 RABEP2Q9H5N1 569 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 GNPTGQ9UJJ9 305 aa17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 RUVBL2Q9Y230 463 aaKnown RBP17.94■□□□□ 0.46
SMARCD3-202ENST00000356800 PRR23AA6NEV1 266 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 INPP4BO15327 924 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 RNGTTO60942 597 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 VPS26AO75436 327 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 APOA4P06727 396 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 BPGMP07738 259 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 ACADMP11310 421 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 ZNF37AP17032 561 aaPredicted RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 CLCN7P51798 805 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 IRX4P78413 519 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 PDAP1Q13442 181 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 CSHL1Q14406 222 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 AGERQ15109 404 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 TSNAXIP1Q2TAA8 658 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 WSCD2Q2TBF2 565 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 TMEM31Q5JXX7 168 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 PTRHD1Q6GMV3 140 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 RAET1GQ6H3X3 334 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 PAQR3Q6TCH7 311 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D1Q86TI0 1168 aaPredicted RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 TRIM42Q8IWZ5 723 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 TMEM151AQ8N4L1 468 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 SIDT2Q8NBJ9 832 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 RAB3IL1Q8TBN0 382 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 CD200R1Q8TD46 325 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 ZNF473Q8WTR7 871 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 HEXDCQ8WVB3 486 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 KLK6Q92876 244 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 TSNARE1Q96NA8 513 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 NELL2Q99435 816 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 C1QTNF2Q9BXJ5 285 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 FAM107BQ9H098 131 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 MANSC1Q9H8J5 431 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 NMRAL1Q9HBL8 299 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 POLMQ9NP87 494 aaPredicted RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 NCKAP1Q9Y2A7 1128 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 A0A1W2PQU0 124 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 WDR91A4D1P6 747 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 SGTAO43765 313 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 CHRM3P20309 590 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 AKT1P31749 480 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 GPR1P46091 355 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 GLRBP48167 497 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 RPS21P63220 83 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 KIAA1161Q6NSJ0 714 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 GJD3Q8N144 294 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 PREBQ9HCU5 417 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 ITM2CQ9NQX7 267 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 FGFR1OP2Q9NVK5 253 aa17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 USP36Q9P275 1121 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-202ENST00000356800 SLC25A14O95258 325 aaPredicted RBP17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 PYGLP06737 847 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 LTA4HP09960 611 aaKnown RBP17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 SBK3P0C264 359 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 ATP1B2P14415 290 aaPredicted RBP17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 ITGB6P18564 788 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 ACSL1P33121 698 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 PPP2CBP62714 309 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 PPP2CAP67775 309 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 LDLRAP1Q5SW96 308 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 DET1Q7L5Y6 550 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 TRIM74Q86UV6 250 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 HORMAD1Q86X24 394 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 NUDCD3Q8IVD9 361 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 CCDC63Q8NA47 563 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 MECRQ9BV79 373 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 SARS2Q9NP81 518 aaKnown RBP17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 MBNL1Q9NR56 388 aaKnown RBP17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 COPG2Q9UBF2 871 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 DHRS7Q9Y394 339 aa17.92■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3DA0A087WVF3 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3IA0A087WXS9 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3EA0A087X179 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3KA0A087X1G2 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3FA6NER0 549 aaPredicted RBP17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3LB9A6J9 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 E5RI56 91 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 H3BMM5 538 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 ATG13O75143 517 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TSPAN12O95859 305 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 PAK4O96013 591 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms