RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF26P17031 533 aaPredicted RBP16.17■□□□□ 0.18
LITAF-201ENST00000339430 CORO1AP31146 461 aaKnown RBP16.17■□□□□ 0.18
LITAF-201ENST00000339430 MC4RP32245 332 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 CLCN4P51793 760 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 DIO3P55073 304 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 TRAP1Q12931 704 aaKnown RBP16.17■□□□□ 0.18
LITAF-201ENST00000339430 TAF1AQ15573 450 aaPredicted RBP16.17■□□□□ 0.18
LITAF-201ENST00000339430 HECTD3Q5T447 861 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 CCDC149Q6ZUS6 474 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 ITIH5Q86UX2 942 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 DHFR2Q86XF0 187 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 DCBLD1Q8N8Z6 715 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 WBP2Q969T9 261 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 DERL2Q9GZP9 239 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 ZNF334Q9HCZ1 680 aaPredicted RBP16.17■□□□□ 0.18
LITAF-201ENST00000339430 SARS2Q9NP81 518 aaKnown RBP16.17■□□□□ 0.18
LITAF-201ENST00000339430 EGFL7Q9UHF1 273 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 RAI2Q9Y5P3 530 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 TCRBV3S1A0A5B6 114 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 C7orf72A4D263 438 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 ANGPT2O15123 496 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 AP1G1O43747 822 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 PABPC4LP0CB38 370 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 ATP6V1B2P21281 511 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 ERVK-21P61565 698 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 LCP2Q13094 533 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 GPM6BQ13491 265 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 C5orf22Q49AR2 442 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 ZRANB3Q5FWF4 1079 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 CWF19L1Q69YN2 538 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 HMBOX1Q6NT76 420 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 UGT3A1Q6NUS8 523 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 TMEM150AQ86TG1 271 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 NAT14Q8WUY8 206 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 FUBP1Q96AE4 644 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 BIRC8Q96P09 236 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 PRPF18Q99633 342 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 CIB1Q99828 191 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 MUC3BQ9H195 1237 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 NOL11Q9H8H0 719 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 CNOT6Q9ULM6 557 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 C2orf78A6NCI8 922 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 CAPNS1P04632 268 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 LBPP18428 481 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 CR2P20023 1033 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 ROR2Q01974 943 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 ZNF177Q13360 481 aaPredicted RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 RNF219Q5W0B1 726 aaPredicted RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 ANKS6Q68DC2 871 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 HACD2Q6Y1H2 254 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 SLC22A17Q8WUG5 538 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
LITAF-201ENST00000339430 GDF15Q99988 308 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 RIMKLBQ9ULI2 386 aa16.16■□□□□ 0.18
LITAF-201ENST00000339430 SNAP91O60641 907 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 CLPTM1O96005 669 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 SLC7A1P30825 629 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 SOX11P35716 441 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 RBBP7Q16576 425 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 TTC16Q8NEE8 873 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 EEF1AKMT1Q8WVE0 214 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 CANT1Q8WVQ1 401 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 PBXIP1Q96AQ6 731 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 ROPN1LQ96C74 230 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 SLC29A1Q99808 456 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 ASB1Q9Y576 335 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 A0A1B0GTW7 788 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 IQCF5A8MTL0 148 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 PER2O15055 1255 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 CLDN11O75508 207 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 STC2O76061 302 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 STAMBPO95630 424 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 NELFEP18615 380 aaKnown RBP16.15■□□□□ 0.18
LITAF-201ENST00000339430 LPOP22079 712 aaPredicted RBP16.15■□□□□ 0.18
LITAF-201ENST00000339430 CTSL3PQ5NE16 218 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 SYVN1Q86TM6 617 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 MYO1HQ8N1T3 1032 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 TEX37Q96LM6 180 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 SAMD11Q96NU1 681 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 ACOX2Q99424 681 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 GRIP2Q9C0E4 1043 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 RNF38Q9H0F5 515 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 IL21Q9HBE4 155 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 AURKCQ9UQB9 309 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 NDUFAF1Q9Y375 327 aa16.15■□□□□ 0.18
LITAF-201ENST00000339430 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 BBIP1A8MTZ0 92 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 ANKRD66B4E2M5 251 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 CCL16O15467 120 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 AKAP10O43572 662 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 F11P03951 625 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 TFAP2AP05549 437 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 FAM58BPP0C7Q3 252 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 PKMP14618 531 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 CKMT2P17540 419 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 ATP6V0D1P61421 351 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms