RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TEKT2Q9UIF3 430 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 AP3D1O14617 1153 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 HBP1O60381 514 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 SLITRK5O94991 958 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 NMBRP28336 390 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 ART3Q13508 389 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 SEL1L3Q68CR1 1132 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 GK5Q6ZS86 529 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 KCNMB4Q86W47 210 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 FANK1Q8TC84 345 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 SLCO4A1Q96BD0 722 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 NRBF2Q96F24 287 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 ACE2Q9BYF1 805 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 WDR41Q9HAD4 459 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 NCAM2O15394 837 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 UPK1BO75841 260 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 GLDCP23378 1020 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 HOXC13P31276 330 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 LIMK2P53671 638 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 OLR1P78380 273 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 SQLEQ14534 574 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 MAPRE2Q15555 327 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 TAF1CQ15572 869 aaPredicted RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 GRTP1Q5TC63 336 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 PLPPR4Q7Z2D5 763 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 ERMP1Q7Z2K6 904 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 IL17RDQ8NFM7 739 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
DFFB-202ENST00000339350 VPS39Q96JC1 886 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 TTPALQ9BTX7 342 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 ALOXE3Q9BYJ1 711 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 TRIM15Q9C019 465 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 CNOT6Q9ULM6 557 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 FZD10Q9ULW2 581 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 RUVBL2Q9Y230 463 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 ZCWPW2A0A1B0GU75 182 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 NEMP2A6NFY4 417 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 C16orf96A6NNT2 1141 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 GAS2O43903 313 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 PGRP06401 933 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.416e-10■■■■■ 42.4
DFFB-202ENST00000339350 TFEBP19484 476 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 RPL9P32969 192 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 GRIK1P39086 918 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 RUNX1T1Q06455 604 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 CTBP1Q13363 440 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 XAF1Q6GPH4 301 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 SLC16A12Q6ZSM3 486 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 TMPRSS9Q7Z410 1059 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 ADCK1Q86TW2 530 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 SLC41A1Q8IVJ1 513 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 SLC22A15Q8IZD6 547 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 FAM83FQ8NEG4 500 aaPredicted RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 TMEM80Q96HE8 168 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 CELF6Q96J87 481 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 ST6GAL2Q96JF0 529 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 SNX7Q9UNH6 387 aa12.5□□□□□ -0.41
DFFB-202ENST00000339350 DIMT1Q9UNQ2 313 aaKnown RBP12.5□□□□□ -0.41
DFFB-202ENST00000339350 RGSL1A5PLK6 1076 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 EEF2KO00418 725 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 TOR1AO14656 332 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 IFNA14P01570 189 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 MLNP12872 115 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 ELK4P28324 431 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 EIF2DP41214 584 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 SOX9P48436 509 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 NUMBP49757 651 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 HLCSP50747 726 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 RFTN1Q14699 578 aaPredicted RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 SLC26A9Q7LBE3 791 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 PIGZQ86VD9 579 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 RNF135Q8IUD6 432 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 OR6Q1Q8NGQ2 317 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 C11orf84Q9BUA3 381 aaPredicted RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 GON7Q9BXV9 100 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 ACOXLQ9NUZ1 547 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 BFARQ9NZS9 450 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 A0A0G2JLL6 359 aaPredicted RBP12.49□□□□□ -0.41
DFFB-202ENST00000339350 FAM149AA5PLN7 773 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 KCNU1A8MYU2 1149 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 GRID2O43424 1007 aa12.49□□□□□ -0.41
DFFB-202ENST00000339350 SSX4O60224 188 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms