RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ADGRG1Q9Y653 693 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 CFAP46Q8IYW2 2715 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 AKR1B15C9JRZ8 316 aaPredicted RBP19.15■□□□□ 0.66
ITGA4-202ENST00000339307 VEGFDO43915 354 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 RASSF9O75901 435 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 UBXN7O94888 489 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 NFKB1P19838 968 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 CDKN2BP42772 138 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 NR2C2P49116 596 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 SEPHS1P49903 392 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 DRG2P55039 364 aaKnown RBP19.15■□□□□ 0.66
ITGA4-202ENST00000339307 GFERP55789 205 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 NOMO1Q15155 1222 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 PID1Q7Z2X4 250 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 CNGA4Q8IV77 575 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 P3H4Q92791 437 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 ZPBPQ9BS86 351 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 FBXO8Q9NRD0 319 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 FAM153AQ9UHL3 310 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 PILRAQ9UKJ1 303 aa19.15■□□□□ 0.66
ITGA4-202ENST00000339307 ZNF891A8MT65 544 aaPredicted RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 CHUKO15111 745 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 PPFIA2O75334 1257 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 STK17BO94768 372 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 PRKAR1AP10644 381 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 PECAM1P16284 738 aaPredicted RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 VCLP18206 1134 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 XRCC1P18887 633 aaPredicted RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 IDSP22304 550 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 MAP4P27816 1152 aaKnown RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 CLCNKAP51800 687 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 UBE2IP63279 158 aaKnown RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 PRKD1Q15139 912 aaPredicted RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 ATP13A5Q4VNC0 1218 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 SPOCD1Q6ZMY3 1216 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 TMEM26Q6ZUK4 368 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 TADA1Q96BN2 335 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 CXorf40BQ96DE9 158 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 GOLPH3Q9H4A6 298 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 CLMPQ9H6B4 373 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 STARD5Q9NSY2 213 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 ZNF624Q9P2J8 865 aaPredicted RBP19.14■□□□□ 0.65
ITGA4-202ENST00000339307 INTUQ9ULD6 942 aa19.14■□□□□ 0.65
ITGA4-202ENST00000339307 LILRA5A6NI73 299 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 WISP1O95388 367 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 ITGB6P18564 788 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 SLC19A1P41440 591 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 MAGEA1P43355 309 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 WNT3AP56704 352 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 TMEM115Q12893 351 aaPredicted RBP19.13■□□□□ 0.65
ITGA4-202ENST00000339307 SLC14A2Q15849 920 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 PPP2R5EQ16537 467 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 KHDC1Q4VXA5 237 aaKnown RBP19.13■□□□□ 0.65
ITGA4-202ENST00000339307 IPMKQ8NFU5 416 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 BLOC1S5Q8TDH9 187 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 ELMO2Q96JJ3 720 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 C9orf72Q96LT7 481 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 TIMM29Q9BSF4 260 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 ALG6Q9Y672 507 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 SLC30A1Q9Y6M5 507 aa19.13■□□□□ 0.65
ITGA4-202ENST00000339307 LOC101059948A0A1B0GTJ6 334 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 OR52A4PA6NMU1 304 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 CAPN5O15484 640 aaPredicted RBP19.12■□□□□ 0.65
ITGA4-202ENST00000339307 NKX2-8O15522 239 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 PSTPIP1O43586 416 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 BUD23O43709 281 aaKnown RBP19.12■□□□□ 0.65
ITGA4-202ENST00000339307 ZRANB2O95218 330 aaKnown RBP eCLIP19.12■□□□□ 0.65
ITGA4-202ENST00000339307 CD68P34810 354 aaPredicted RBP19.12■□□□□ 0.65
ITGA4-202ENST00000339307 CHRNA4P43681 627 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 CCR10P46092 362 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 POLE2P56282 527 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 WASHC5Q12768 1159 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 SIRPB2Q5JXA9 342 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 C16orf46Q6P387 395 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 FAM151BQ6UXP7 276 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 ATG14Q6ZNE5 492 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 GLT6D1Q7Z4J2 308 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 ZNF547Q8IVP9 402 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 EFHD1Q9BUP0 239 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 ULBP3Q9BZM4 244 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 SLC25A18Q9H1K4 315 aa19.12■□□□□ 0.65
ITGA4-202ENST00000339307 GEMIN8Q9NWZ8 242 aaKnown RBP19.12■□□□□ 0.65
ITGA4-202ENST00000339307 NFKBIL1Q9UBC1 381 aaPredicted RBP19.12■□□□□ 0.65
ITGA4-202ENST00000339307 MTSS1O43312 755 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 HMGCLP35914 325 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 SPAM1P38567 509 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 HALP42357 657 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 LEPRP48357 1165 aaKnown RBP19.11■□□□□ 0.65
ITGA4-202ENST00000339307 TFDP3Q5H9I0 405 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 CCDC181Q5TID7 509 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 IRGCQ6NXR0 463 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 TIPARPQ7Z3E1 657 aaKnown RBP19.11■□□□□ 0.65
ITGA4-202ENST00000339307 PTRH1Q86Y79 214 aaKnown RBP19.11■□□□□ 0.65
ITGA4-202ENST00000339307 BRSK1Q8TDC3 778 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 VPS35Q96QK1 796 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 FSD1LQ9BXM9 530 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 TRIT1Q9H3H1 467 aaKnown RBP19.11■□□□□ 0.65
ITGA4-202ENST00000339307 TRABDQ9H4I3 376 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 UCK1Q9HA47 277 aa19.11■□□□□ 0.65
ITGA4-202ENST00000339307 POT1Q9NUX5 634 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms