RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ZXDCQ2QGD7 858 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 GPR158Q5T848 1215 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 CPLX4Q7Z7G2 160 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 C11orf96Q7Z7L8 435 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TMEM25Q86YD3 366 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 CRLF3Q8IUI8 442 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 EZH1Q92800 747 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ROPN1LQ96C74 230 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 LRRC37BQ96QE4 947 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 CADM1Q9BY67 442 aaKnown RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TUBB1Q9H4B7 451 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 NSUN3Q9H649 340 aaKnown RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 XPR1Q9UBH6 696 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PCOLCE2Q9UKZ9 415 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 GPR45Q9Y5Y3 372 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 A0A1W2PRU2 124 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TLDC2A0PJX2 215 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ACOT8O14734 319 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 GSC2O15499 205 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ZBTB14O43829 449 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ESRRBO95718 433 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 HSD3B1P14060 373 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TYRP14679 529 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 COL9A1P20849 921 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 JAK1P23458 1154 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 HSD3B2P26439 372 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TYK2P29597 1187 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PNLIPRP1P54315 467 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 SQLEQ14534 574 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 DNAL1Q4LDG9 190 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PIGGQ5H8A4 983 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 LDLRAP1Q5SW96 308 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PIP5KL1Q5T9C9 394 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 C12orf40Q86WS4 652 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 CFAP52Q8N1V2 620 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 MINDY1Q8N5J2 469 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 SMRP1Q8NCR6 262 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 OR56A3Q8NH54 315 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 KCTD4Q8WVF5 259 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC30A3Q99726 388 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 MECRQ9BV79 373 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TNKS2Q9H2K2 1166 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 EML4Q9HC35 981 aaKnown RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 HCFC1R1Q9NWW0 138 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 NCKIPSDQ9NZQ3 722 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TMEM181Q9P2C4 612 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 IL36AQ9UHA7 158 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ZNF639Q9UID6 485 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ZDHHC2Q9UIJ5 367 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 FZD4Q9ULV1 537 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 KCTD3Q9Y597 815 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 TNPO3Q9Y5L0 923 aaKnown RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 MAD1L1Q9Y6D9 718 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 FCHO1O14526 889 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PEX11AO75192 247 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PRSS23O95084 383 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 MT-CO1P00395 513 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ABCB1P08183 1280 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 CYP2A6P11509 494 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PPARGP37231 505 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ARFIP2P53365 341 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 POLR2LP62875 67 aaKnown RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 PLOD1Q02809 727 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ZBTB16Q05516 673 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 LCP2Q13094 533 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 MTAPQ13126 283 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 DLG2Q15700 870 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 WASH2PQ6VEQ5 465 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 SDCCAG8Q86SQ7 713 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ZNF781Q8N8C0 355 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 GPR26Q8NDV2 337 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 DENND6BQ8NEG7 585 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 STAG3L4Q8TBR4 150 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 RHBDF1Q96CC6 855 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 IFT43Q96FT9 208 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 RAB3IPQ96QF0 476 aaPredicted RBP5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 HEPHQ9BQS7 1158 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 IER2Q9BTL4 223 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 SGPP1Q9BX95 441 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 DPEP2Q9H4A9 486 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 WASH6PQ9NQA3 447 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ARL8BQ9NVJ2 186 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ZIM2Q9NZV7 527 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC25A13Q9UJS0 675 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 NUDT5Q9UKK9 219 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 LRRC42Q9Y546 428 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 ACTL7AQ9Y615 435 aa5.3□□□□□ -1.56
PRPF4B-201ENST00000337659 UBA6A0AVT1 1052 aaPredicted RBP5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 VEGFDO43915 354 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 DNAJA2O60884 412 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 CDK14O94921 469 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 LMNAP02545 664 aaKnown RBP5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 SEMG1P04279 462 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 CYBBP04839 570 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 LTBRP36941 435 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 RASSF2P50749 326 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 GZMMP51124 257 aa5.29□□□□□ -1.56
PRPF4B-201ENST00000337659 AP1S2P56377 157 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms