RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ALG9Q9H6U8 611 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 MID2Q9UJV3 735 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 LRRK1Q38SD2 2015 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 PLXNB3Q9ULL4 1909 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 PLXNA2O75051 1894 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 IGLV3-16A0A075B6K0 115 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 PRR23AA6NEV1 266 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 ZBTB14O43829 449 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 RBP1P09455 135 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CD1DP15813 335 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 MSH3P20585 1137 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 GPR1P46091 355 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 ZNF648Q5T619 568 aaPredicted RBP14.53□□□□□ -0.08
CBX3-201ENST00000337620 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 RAET1GQ6H3X3 334 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 ADHFE1Q8IWW8 467 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CPNE9Q8IYJ1 553 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 PELI3Q8N2H9 469 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 NKAPQ8N5F7 415 aaKnown RBP14.53□□□□□ -0.08
CBX3-201ENST00000337620 OR14C36Q8NHC7 312 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 MAFAQ8NHW3 353 aaPredicted RBP14.53□□□□□ -0.08
CBX3-201ENST00000337620 RDH11Q8TC12 318 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 LKAAEAR1Q8TD35 194 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 BTN2A2Q8WVV5 523 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 GLYATL1Q969I3 302 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CD248Q9HCU0 757 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 DHRS7Q9Y394 339 aa14.53□□□□□ -0.08
CBX3-201ENST00000337620 CFAP99D6REC4 459 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 K7ESM1 405 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 TM7SF2O76062 418 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 OR56A5P0C7T3 313 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 RALBP11234 206 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 ATP1B2P14415 290 aaPredicted RBP14.52□□□□□ -0.09
CBX3-201ENST00000337620 IL2P60568 153 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 CREB5Q02930 508 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 TECRLQ5HYJ1 363 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 ZNF765Q7L2R6 523 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 ISCA2Q86U28 154 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 FLCNQ8NFG4 579 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 EEF1AKMT1Q8WVE0 214 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 SREK1Q8WXA9 508 aaKnown RBP14.52□□□□□ -0.09
CBX3-201ENST00000337620 VPS35Q96QK1 796 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 ELAC2Q9BQ52 826 aaKnown RBP14.52□□□□□ -0.09
CBX3-201ENST00000337620 TSSK1BQ9BXA7 367 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 MMP17Q9ULZ9 603 aa14.52□□□□□ -0.09
CBX3-201ENST00000337620 TARM1B6A8C7 271 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 ACADMP11310 421 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 FGF3P11487 239 aaPredicted RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 BST1Q10588 318 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 STX3Q13277 289 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 TTC31Q49AM3 519 aaPredicted RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 HSF5Q4G112 596 aaPredicted RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 KHDC1Q4VXA5 237 aaKnown RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 LDLRAP1Q5SW96 308 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 KIAA1324Q6UXG2 1013 aaKnown RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 ZYG11AQ6WRX3 759 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 NAPRTQ6XQN6 538 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 Q6ZS52 159 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 DDHD1Q8NEL9 900 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 INPP5DQ92835 1189 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 PTERQ96BW5 349 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 LINGO1Q96FE5 620 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 MRGPRX1Q96LB2 322 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 ARHGEF3Q9NR81 526 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 MBD1Q9UIS9 605 aaPredicted RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 TSR3Q9UJK0 312 aaKnown RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 SORCS3Q9UPU3 1222 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 TCRBV21S2A2A0A5A6 115 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 KLF11O14901 512 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 EDF1O60869 148 aaKnown RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 ZP2Q05996 745 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 DPTQ07507 201 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 CES4AQ5XG92 561 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 SEL1L3Q68CR1 1132 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 OTOAQ7RTW8 1153 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 FAM124AQ86V42 546 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 RAB3IL1Q8TBN0 382 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 PANX3Q96QZ0 392 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 DERL2Q9GZP9 239 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 SPATS2LQ9NUQ6 558 aaKnown RBP14.51□□□□□ -0.09
CBX3-201ENST00000337620 OXSMQ9NWU1 459 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 FBXL21Q9UKT6 434 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 SCML1Q9UN30 329 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 NCKAP1Q9Y2A7 1128 aa14.51□□□□□ -0.09
CBX3-201ENST00000337620 DLX3O60479 287 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TRIM13O60858 407 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 SOD1P00441 154 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 CHRNB1P11230 501 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 NDUFV2P19404 249 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 KCNC1P48547 511 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 ZBTB16Q05516 673 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 CRY1Q16526 586 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 GKAP1Q5VSY0 366 aaPredicted RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 PHYKPLQ8IUZ5 450 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 KLK6Q92876 244 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 EXT2Q93063 718 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 THOC1Q96FV9 657 aaKnown RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 OSBPL6Q9BZF3 934 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 ZNF395Q9H8N7 513 aaPredicted RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 LMAN1LQ9HAT1 526 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms