RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SERPINA13PQ6UXR4 307 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 TMC5Q6UXY8 1006 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 KCTD8Q6ZWB6 473 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 DNAJB7Q7Z6W7 309 aaPredicted RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 RASAL3Q86YV0 1011 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ZCCHC7Q8N3Z6 543 aaKnown RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 FIBCD1Q8N539 461 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ZNF614Q8N883 585 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 CAPSLQ8WWF8 208 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 BORCS5Q969J3 196 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 VPS33AQ96AX1 596 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 TCF12Q99081 682 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 NFKBIZQ9BYH8 718 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SLC25A51Q9H1U9 297 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SYNDIG1Q9H7V2 258 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ZFYVE1Q9HBF4 777 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 RCOR3Q9P2K3 495 aaPredicted RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SRRDQ9UH36 339 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 HMX2A2RU54 273 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 UNCXA6NJT0 531 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 C5orf58C9J3I9 102 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 K7EPI3 171 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 PLOD2O00469 737 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 EI24O14681 340 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ULK1O75385 1050 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 POLR2EP19388 210 aaKnown RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 CCNA2P20248 432 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 CDH5P33151 784 aaPredicted RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 GPC1P35052 558 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 GDF5P43026 501 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 UPP1Q16831 310 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SETMARQ53H47 684 aaPredicted RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 FGD3Q5JSP0 725 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 CST9Q5W186 159 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 TMEM214Q6NUQ4 689 aaKnown RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 CRTC3Q6UUV7 619 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ANKRD46Q86W74 232 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 CMTM8Q8IZV2 173 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SIDT2Q8NBJ9 832 aaKnown RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SPPL2AQ8TCT8 520 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 MCOLN3Q8TDD5 553 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 KHSRPQ92945 711 aaKnown RBP eCLIP6.43□□□□□ -1.381e-6■■■■□ 21.2
HMG20A-201ENST00000336216 FAR2Q96K12 515 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 NSMCE2Q96MF7 247 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SMIM14Q96QK8 99 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 WRAP53Q9BUR4 548 aaKnown RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SLC25A23Q9BV35 468 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ADI1Q9BV57 179 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 EXOSC4Q9NPD3 245 aaKnown RBP6.43□□□□□ -1.38
HMG20A-201ENST00000336216 SPG21Q9NZD8 308 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 BLOC1S6Q9UL45 172 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 OAZ3Q9UMX2 235 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 ST14Q9Y5Y6 855 aa6.43□□□□□ -1.38
HMG20A-201ENST00000336216 C7orf72A4D263 438 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 AURKAO14965 403 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 FFAR2O15552 330 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 MGEA5O60502 916 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PRAMEF1O95521 474 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 NDST3O95803 873 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PFKMP08237 780 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 IL4RP24394 825 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 SERPINB1P30740 379 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 RXRGP48443 463 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PRKAG1P54619 331 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 MRPS15P82914 257 aaKnown RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 CAMK2GQ13555 558 aaPredicted RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 CCDC85BQ15834 202 aaPredicted RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 TSTD2Q5T7W7 516 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 FAM219BQ5XKK7 198 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PPP4R4Q6NUP7 873 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 DUS1LQ6P1R4 473 aaKnown RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PRR23BQ6ZRT6 265 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 NCCRP1Q6ZVX7 275 aaPredicted RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 FAM124AQ86V42 546 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 MICU2Q8IYU8 434 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 ACVR1CQ8NER5 493 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 VPS37AQ8NEZ2 397 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 TNIP2Q8NFZ5 429 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 HTRA1Q92743 480 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 ISOC1Q96CN7 298 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PLEKHA8Q96JA3 519 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 FEM1CQ96JP0 617 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 SLC9A7Q96T83 725 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 EPS8L2Q9H6S3 715 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 FANCEQ9HB96 536 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 VTI1BQ9UEU0 232 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 CNOT6Q9ULM6 557 aaKnown RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 RAD54BQ9Y620 910 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 SLC38A8A6NNN8 435 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 H3BNX3 289 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 HTRA2O43464 458 aaPredicted RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 H2AFYO75367 372 aaKnown RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 CLDN11O75508 207 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 LDLRP01130 860 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 KRT6AP02538 564 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 KRT6BP04259 564 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 FGF1P05230 155 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PRSS56P0CW18 603 aa6.42□□□□□ -1.38
HMG20A-201ENST00000336216 PKMP14618 531 aaKnown RBP6.42□□□□□ -1.38
HMG20A-201ENST00000336216 HLA-DPA1P20036 260 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms