RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SLC27A5Q9Y2P5 690 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 PCDHGA8Q9Y5G5 932 aa23.41■■□□□ 1.34
TSKU-201ENST00000333090 CCDC162PA2VCL2 907 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 GJB3O75712 270 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 PRSS56P0CW18 603 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 HTR7P34969 479 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 EIF2B2P49770 351 aaKnown RBP23.4■■□□□ 1.34
TSKU-201ENST00000333090 AGTR2P50052 363 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 IST1P53990 364 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 CBX2Q14781 532 aaPredicted RBP23.4■■□□□ 1.34
TSKU-201ENST00000333090 TSNQ15631 228 aaKnown RBP23.4■■□□□ 1.34
TSKU-201ENST00000333090 CRY1Q16526 586 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 PIWIL3Q7Z3Z3 882 aaKnown RBP23.4■■□□□ 1.34
TSKU-201ENST00000333090 LRRC49Q8IUZ0 686 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 OR13C4Q8NGS5 318 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 OR2T11Q8NH01 316 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 CCDC138Q96M89 665 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 SP110Q9HB58 689 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 MAGEL2Q9UJ55 1249 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 IKZF3Q9UKT9 509 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 KERAO60938 352 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 CHEK2O96017 543 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 NFKBIAP25963 317 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 MTHFRP42898 656 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 PLIN5Q00G26 463 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 SKIV2LQ15477 1246 aaKnown RBP23.4■■□□□ 1.34
TSKU-201ENST00000333090 MEP1AQ16819 746 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 TIGD5Q53EQ6 642 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 RBM48Q5RL73 367 aaKnown RBP23.4■■□□□ 1.34
TSKU-201ENST00000333090 PAQR3Q6TCH7 311 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 SYVN1Q86TM6 617 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 HID1Q8IV36 788 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 FNDC5Q8NAU1 212 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 ESAMQ96AP7 390 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 ZNF599Q96NL3 588 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 ABCC13Q9NSE7 274 aa23.4■■□□□ 1.34
TSKU-201ENST00000333090 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.4■■□□□ 1.346e-8■■■■■ 26.9
TSKU-201ENST00000333090 TTC36A6NLP5 189 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 XYLBO75191 536 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 BCAS1O75363 584 aaPredicted RBP23.39■■□□□ 1.34
TSKU-201ENST00000333090 THP07101 528 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 TMED10P49755 219 aaKnown RBP23.39■■□□□ 1.34
TSKU-201ENST00000333090 SELPLGQ14242 412 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 PERM1Q5SV97 790 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 UGT3A1Q6NUS8 523 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 ZDHHC13Q8IUH4 622 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 NPLOC4Q8TAT6 608 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 LPPQ93052 612 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 PSMG2Q969U7 264 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 ZNF347Q96SE7 839 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 BRINP2Q9C0B6 783 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 SMURF2Q9HAU4 748 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 MIOSQ9NXC5 875 aa23.39■■□□□ 1.34
TSKU-201ENST00000333090 KRBA1A5PL33 1030 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 C16orf96A6NNT2 1141 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 KPNA4O00629 521 aaPredicted RBP23.39■■□□□ 1.33
TSKU-201ENST00000333090 ENPP3O14638 875 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 ECI2O75521 394 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 ATXN1LP0C7T5 689 aaKnown RBP23.39■■□□□ 1.33
TSKU-201ENST00000333090 RAD23AP54725 363 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 GRIK2Q13002 908 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 SLC35B4Q969S0 331 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 KIAA1191Q96A73 305 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 TRIM62Q9BVG3 475 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 SMOC2Q9H3U7 446 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 ZNF225Q9UK10 706 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 RHOBTB1O94844 696 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 F2P00734 622 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 ALDH2P05091 517 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 RAP2AP10114 183 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 SUOXP51687 545 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 CHRNB3Q05901 458 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 TRIP12Q14669 1992 aaPredicted RBP23.39■■□□□ 1.33
TSKU-201ENST00000333090 RBBP7Q16576 425 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 FAM98BQ52LJ0 330 aaKnown RBP23.39■■□□□ 1.33
TSKU-201ENST00000333090 PROKR1Q8TCW9 393 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 SDCCAG3Q96C92 435 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 SH3YL1Q96HL8 342 aaPredicted RBP23.39■■□□□ 1.33
TSKU-201ENST00000333090 TMEM209Q96SK2 561 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 PDE10AQ9Y233 779 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 PCDHB3Q9Y5E6 796 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 ST14Q9Y5Y6 855 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 CPQQ9Y646 472 aa23.39■■□□□ 1.33
TSKU-201ENST00000333090 TTC3P53804 2025 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 CCL15-CCL14A0A0B4J2E2 113 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 CLDN25C9JDP6 229 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 NOBOXO60393 691 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 TULP3O75386 442 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 ERVK-8P63133 956 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 OCA2Q04671 838 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 CCL15Q16663 113 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 GPR142Q7Z601 462 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 AARSD1Q9BTE6 412 aaKnown RBP23.38■■□□□ 1.33
TSKU-201ENST00000333090 BAG5Q9UL15 447 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 DICER1Q9UPY3 1922 aaKnown RBP23.38■■□□□ 1.33
TSKU-201ENST00000333090 FAM234BA2RU67 622 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 CDC7O00311 574 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 HTR1AP08908 422 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 HTR1BP28222 390 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 PRKG2Q13237 762 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms