RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 DTX3LQ8TDB6 740 aa20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 TFB2MQ9H5Q4 396 aaKnown RBP20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 GTSE1Q9NYZ3 720 aa20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 NCKIPSDQ9NZQ3 722 aa20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 CRLS1Q9UJA2 301 aa20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 TRMT6Q9UJA5 497 aaKnown RBP20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 IKZF3Q9UKT9 509 aa20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 PCDHB1Q9Y5F3 818 aa20.08■□□□□ 0.8
RIPPLY3-201ENST00000329553 AGAP14A8MT82 685 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 NPHS1O60500 1241 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 IDH3AP50213 366 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 DLX2Q07687 328 aaPredicted RBP20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 RUNX3Q13761 415 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 POM121L1PQ3SYA9 428 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 GPR33Q49SQ1 333 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 TTC1Q99614 292 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZDHHC2Q9UIJ5 367 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 LRCH1Q9Y2L9 728 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 PRSS21Q9Y6M0 314 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 TSPAN11A1L157 253 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 E5RI56 91 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 CPOXP36551 454 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 SPINT3P49223 89 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 CLCN7P51798 805 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZNF805Q5CZA5 627 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 CFAP157Q5JU67 520 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 PIWIL4Q7Z3Z4 852 aaKnown RBP20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 RBFAQ8N0V3 343 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 PHTF2Q8N3S3 785 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 NKAPQ8N5F7 415 aaKnown RBP20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 CLDN19Q8N6F1 224 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 RHEBL1Q8TAI7 183 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 KIAA1191Q96A73 305 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 LRIG1Q96JA1 1093 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 ATOH8Q96SQ7 321 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 CLPBQ9H078 707 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 S1PR5Q9H228 398 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 SARS2Q9NP81 518 aaKnown RBP20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 PCDH12Q9NPG4 1184 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 SLC7A8Q9UHI5 535 aa20.07■□□□□ 0.8
RIPPLY3-201ENST00000329553 TSPAN12O95859 305 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 HLA-EP13747 358 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 MTHFD2P13995 350 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 RPS3P23396 243 aaKnown RBP eCLIP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 OPRD1P41143 372 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 RPL14P50914 215 aaKnown RBP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 ACTR3P61158 418 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 KLC1Q07866 573 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 PRKAA1Q13131 559 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 FNDC3BQ53EP0 1204 aaKnown RBP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 LYPLAL1Q5VWZ2 237 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 RPS27LQ71UM5 84 aaKnown RBP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 SLC22A9Q8IVM8 553 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 TDHQ8IZJ6 230 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 NXPE1Q8N323 547 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 EEF1AKMT1Q8WVE0 214 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 EXT2Q93063 718 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 CNDP1Q96KN2 507 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 PANX3Q96QZ0 392 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 KXD1Q9BQD3 176 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 COG4Q9H9E3 785 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 DNAJC28Q9NX36 388 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 KIF26AQ9ULI4 1882 aaPredicted RBP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 UPK3BL1B0FP48 263 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 UPK3BL2E5RIL1 263 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 VIPR1P32241 457 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 GJA4P35212 333 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 ARHGEF7Q14155 803 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 ATP13A5Q4VNC0 1218 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 PTRHD1Q6GMV3 140 aaKnown RBP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 CES5AQ6NT32 575 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 RIPOR1Q6ZS17 1223 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 MYLK4Q86YV6 388 aaPredicted RBP20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 CPNE9Q8IYJ1 553 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 TERB1Q8NA31 727 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 MAPK15Q8TD08 544 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 CLPTM1LQ96KA5 538 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 THTPAQ9BU02 230 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 DKK3Q9UBP4 350 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 SARDHQ9UL12 918 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 DHRS7Q9Y394 339 aa20.06■□□□□ 0.8
RIPPLY3-201ENST00000329553 ANTXRLA6NF34 631 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 C16orf96A6NNT2 1141 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 UBXN8O00124 270 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 CDC7O00311 574 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 CIB2O75838 187 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 CYP2A6P11509 494 aaPredicted RBP20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 HNRNPLP14866 589 aaKnown RBP eCLIP20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 IMPDH1P20839 514 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 IL2P60568 153 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 ATP6V0D1P61421 351 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 IRGCQ6NXR0 463 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 PARM1Q6UWI2 310 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 YAF2Q8IY57 180 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 CPA6Q8N4T0 437 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 STAG3L4Q8TBR4 150 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 PLEKHG4BQ96PX9 1271 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 RPP25Q9BUL9 199 aaKnown RBP20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 CD84Q9UIB8 345 aa20.05■□□□□ 0.8
RIPPLY3-201ENST00000329553 XIRP2A4UGR9 3374 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms