RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KCNJ11Q14654 390 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 MS4A13Q5J8X5 152 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 GTF2H2CQ6P1K8 395 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TAS1R3Q7RTX0 852 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 LRRC70Q7Z2Q7 622 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 BANPQ8N9N5 519 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF296Q8WUU4 475 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 AGAP2Q99490 1192 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 AARSD1Q9BTE6 412 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 SLC2A11Q9BYW1 496 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 FAM192AQ9GZU8 254 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 PLK2Q9NYY3 685 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TMEM59LQ9UK28 342 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 AJAP1Q9UKB5 411 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 RGS20O76081 388 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 GSTM4Q03013 218 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 NR1D2Q14995 579 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 PRR23BQ6ZRT6 265 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 UTP15Q8TED0 518 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 STRA6Q9BX79 667 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 FKBPLQ9UIM3 349 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 MYL12BO14950 172 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PRAMEF11O60813 436 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SOCS5O75159 536 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 ADH1BP00325 375 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 TRBC1P01850 177 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 GALTP07902 379 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 ACRP10323 421 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PTX3P26022 381 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF776Q68DI1 518 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 VITQ6UXI7 678 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 TWIST2Q8WVJ9 160 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 DDX1Q92499 740 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 NXNL1Q96CM4 212 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 IPPKQ9H8X2 491 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SLC17A7Q9P2U7 560 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 INPPL1O15357 1258 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 STX11O75558 287 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 HNF4AP41235 474 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 HERC3Q15034 1050 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 CAMKK1Q8N5S9 505 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 RORBQ92753 470 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF641Q96N77 438 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 EFCAB11Q9BUY7 163 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 CAB39LQ9H9S4 337 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 POLR3HQ9Y535 204 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 C9IYK1 514 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SUV39H1O43463 412 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 GSRP00390 522 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SLC35G6P0C7Q6 338 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 VARSP26640 1264 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 NMBRP28336 390 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 IRF7Q92985 503 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 MYDGFQ969H8 173 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SLC29A3Q9BZD2 475 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 TNKS2Q9H2K2 1166 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 TELO2Q9Y4R8 837 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PCDHGC4Q9Y5F7 938 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PRMT3O60678 531 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 IL6P05231 212 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 UGT2B15P54855 530 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 DLG1Q12959 904 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 DNAJC14Q6Y2X3 702 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 OR6K2Q8NGY2 324 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PWWP2AQ96N64 755 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 KLHL25Q9H0H3 589 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 GABRQQ9UN88 632 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 RUVBL1Q9Y265 456 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SCAMP3O14828 347 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PEX1O43933 1283 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SCELO95171 688 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 FYNP06241 537 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 LINC00032P0C843 101 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 EPORP19235 508 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 POLR2JP52435 117 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SRSF11Q05519 484 aaKnown RBP11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SCAPQ12770 1279 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 PPP4R4Q6NUP7 873 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 LINGO4Q6UY18 593 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 LUZP2Q86TE4 346 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 SPATA22Q8NHS9 363 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 LMO3Q8TAP4 145 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 CLEC4CQ8WTT0 213 aa11.31□□□□□ -0.6
COL4A5-201ENST00000328300 MFSD3Q96ES6 412 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms