RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 NSUN5Q96P11 429 aaKnown RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 FAM49AQ9H0Q0 323 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 AIG1Q9NVV5 245 aa12.68□□□□□ -0.38
CCDC60-201ENST00000327554 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
CCDC60-201ENST00000327554 RALGAPA2Q2PPJ7 1873 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 A0A1B0GTL3 188 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 A0A1W2PQ67 120 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 KMOO15229 486 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CNTN5O94779 1100 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 PTTG1O95997 202 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 PRR35P0CG20 571 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 LMO2P25791 158 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CHRNA4P43681 627 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 MASP1P48740 699 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 HCAR3P49019 387 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 MRPL19P49406 292 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 UFM1P61960 85 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CHRNB3Q05901 458 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 RSBN1Q5VWQ0 802 aaPredicted RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 TXNDC11Q6PKC3 985 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 METTL7BQ6UX53 244 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 HFE2Q6ZVN8 426 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CCDC117Q8IWD4 279 aaPredicted RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 NLGN1Q8N2Q7 840 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 KIAA1958Q8N8K9 716 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 PTGR2Q8N8N7 351 aaPredicted RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 FAM83FQ8NEG4 500 aaPredicted RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CNIH3Q8TBE1 160 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 ATL1Q8WXF7 558 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 RPL3LQ92901 407 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 TSPAN17Q96FV3 270 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CDK5RAP1Q96SZ6 601 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 WDR6Q9NNW5 1121 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 IL37Q9NZH6 218 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 FBXO10Q9UK96 956 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 AAR2Q9Y312 384 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CCDC154A6NI56 674 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 ANXA6P08133 673 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 PAMP19021 973 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 RYKP34925 604 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CDKN2DP55273 166 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CCNA1P78396 465 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 SCAPQ12770 1279 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 LY6KQ17RY6 165 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 ABI1Q8IZP0 508 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 CRYBG2Q8N1P7 616 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 EXT2Q93063 718 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 NTAN1Q96AB6 310 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 REXO5Q96IC2 774 aaKnown RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 ASB2Q96Q27 587 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 SLC2A13Q96QE2 648 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 ANKHQ9HCJ1 492 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 DNAJB9Q9UBS3 223 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 N6AMT1Q9Y5N5 214 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 SNX10Q9Y5X0 201 aa12.67□□□□□ -0.38
CCDC60-201ENST00000327554 MN1Q10571 1320 aaPredicted RBP12.67□□□□□ -0.38
CCDC60-201ENST00000327554 SAGE2PA6NJ88 616 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 SYCE1LA8MT33 242 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 TAF4O00268 1085 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 PRMT5O14744 637 aaPredicted RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 RAD51BO15315 384 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CYBBP04839 570 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 PRKCAP17252 672 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 IL12AP29459 219 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 ADRA1AP35348 466 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 NDUFV1P49821 464 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 BACE1P56817 501 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CHRNEQ04844 493 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 LAPTM5Q13571 262 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CLCA4Q14CN2 919 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 KIAA0319Q5VV43 1072 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 HID1Q8IV36 788 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 LGALS12Q96DT0 336 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CELF6Q96J87 481 aaKnown RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 TSGA13Q96PP4 275 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 SLC9A7Q96T83 725 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 ARPC5LQ9BPX5 153 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 RBM4BQ9BQ04 359 aaKnown RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 RBM4Q9BWF3 364 aaKnown RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 MIR1-1HGQ9H1L0 117 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 OPTCQ9UBM4 332 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CCNKO75909 580 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 FYNP06241 537 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 MMP10P09238 476 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 CLCNKBP51801 687 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 POLR2JP52435 117 aaKnown RBP12.66□□□□□ -0.38
CCDC60-201ENST00000327554 GRIK2Q13002 908 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 NPTX1Q15818 432 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 LAIR1Q6GTX8 287 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 TUBA3EQ6PEY2 450 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 ENPP6Q6UWR7 440 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 UTS2BQ765I0 119 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 SPATA19Q7Z5L4 167 aa12.66□□□□□ -0.38
CCDC60-201ENST00000327554 PIM3Q86V86 326 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms