RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RSL1D1O76021 490 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 PAPSS2O95340 614 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 GSNP06396 782 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 HSPA7P48741 367 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 LSM3P62310 102 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 ZNF177Q13360 481 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 AP5B1Q2VPB7 878 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 BIRC7Q96CA5 298 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 ATOH8Q96SQ7 321 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 POLR3BQ9NW08 1133 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 WWOXQ9NZC7 414 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 DGKBQ9Y6T7 804 aa12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 NUP214P35658 2090 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 FXYD1O00168 92 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 DUSP11O75319 330 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 DEAF1O75398 565 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 IL7RP16871 459 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 CCR3P51677 355 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 HMGCS1Q01581 520 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 GNA12Q03113 381 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 PMS2P3Q13401 168 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 KCNA10Q16322 511 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 BLOC1S3Q6QNY0 202 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 AFTPHQ6ULP2 937 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM151BQ6UXP7 276 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 CCDC81Q6ZN84 652 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 GCNT7Q6ZNI0 430 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 ANKFN1Q8N957 763 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 SYT17Q9BSW7 474 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 TFB2MQ9H5Q4 396 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 RPF2Q9H7B2 306 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 FANCEQ9HB96 536 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 ARNT2Q9HBZ2 717 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 HSFX1Q9UBD0 423 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 AGO1Q9UL18 857 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 ASB1Q9Y576 335 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 HS6ST1O60243 411 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 PEX11BO96011 259 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 G6PDP11413 515 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 BMP2P12643 396 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 CAPGP40121 348 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 GSSP48637 474 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 UGT3A2Q3SY77 523 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 PARP15Q460N3 678 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 OR10A6Q8NH74 314 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 GFM2Q969S9 779 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 KIAA1191Q96A73 305 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 NRBF2Q96F24 287 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 MUS81Q96NY9 551 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 SDR39U1Q9NRG7 319 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 CNOT11Q9UKZ1 510 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 RAI2Q9Y5P3 530 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 MYO1GB0I1T2 1018 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 SH3BGRLO75368 114 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 ZNF182P17025 639 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 LPOP22079 712 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 HTR7P34969 479 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 PTGR1Q14914 329 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 ANKDD1AQ495B1 522 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM98BQ52LJ0 330 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 TBC1D21Q8IYX1 336 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 NKAPQ8N5F7 415 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 HM13Q8TCT9 377 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 FEM1CQ96JP0 617 aa12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 IFT80Q9P2H3 777 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-201ENST00000325110 MROH6A6NGR9 719 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 GPIP06744 558 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 MTHFRP42898 656 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC11A2P49281 568 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 GATMP50440 423 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 TNK2Q07912 1038 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 ARHGEF7Q14155 803 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 MYBPC3Q14896 1274 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 RAB39AQ14964 217 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 TRIP4Q15650 581 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 AARS2Q5JTZ9 985 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 C6orf136Q5SQH8 315 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 SERINC5Q86VE9 423 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 HS3ST5Q8IZT8 346 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 FUBP1Q96AE4 644 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 TMEM125Q96AQ2 219 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 SMURF2Q9HAU4 748 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
HMGCS1-201ENST00000325110 SCML2Q9UQR0 700 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms