RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TFAMQ00059 246 aaKnown RBP6.58□□□□□ -1.36
CSTF3-201ENST00000323959 DHX34Q14147 1143 aaKnown RBP6.58□□□□□ -1.36
CSTF3-201ENST00000323959 NFATC4Q14934 902 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 TAF8Q7Z7C8 310 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 TMEM110Q86TL2 294 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 CAVIN3Q969G5 261 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 RNF34Q969K3 372 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 PIP5K1AQ99755 562 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 NUP85Q9BW27 656 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 NT5C1AQ9BXI3 368 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 CLEC4MQ9H2X3 399 aaPredicted RBP6.58□□□□□ -1.36
CSTF3-201ENST00000323959 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 ZNF552Q9H707 407 aaPredicted RBP6.58□□□□□ -1.36
CSTF3-201ENST00000323959 LRTM1Q9HBL6 345 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 DDX56Q9NY93 547 aaKnown RBP6.58□□□□□ -1.36
CSTF3-201ENST00000323959 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 KLQ9UEF7 1012 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 CNOT8Q9UFF9 292 aaKnown RBP6.58□□□□□ -1.36
CSTF3-201ENST00000323959 SLCO3A1Q9UIG8 710 aa6.58□□□□□ -1.36
CSTF3-201ENST00000323959 FAM187AA6NFU0 413 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 NDC80O14777 642 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ERLIN1O75477 346 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SLCO2B1O94956 709 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PCK1P35558 622 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PEX19P40855 299 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 GPD2P43304 727 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 FNTAP49354 379 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PDE1BQ01064 536 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 KEAP1Q14145 624 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 Q5PR19 223 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SPOPLQ6IQ16 392 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 DAAM2Q86T65 1068 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CDC20BQ86Y33 519 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CIARTQ8N365 385 aaPredicted RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 OR10G6Q8NH81 332 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 EXD1Q8NHP7 514 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 GRIN3AQ8TCU5 1115 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 AZIN2Q96A70 460 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ZNF653Q96CK0 615 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 LCORQ96JN0 433 aaPredicted RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 HSFY1Q96LI6 401 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 MED10Q9BTT4 135 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PHACTR1Q9C0D0 580 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 LRRC19Q9H756 370 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 COQ3Q9NZJ6 369 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SEC14L3Q9UDX4 400 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 TFR2Q9UP52 801 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 BTRCQ9Y297 605 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ZNF835Q9Y2P0 537 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 FADS3Q9Y5Q0 445 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SMAD7O15105 426 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 BUB1O43683 1085 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 AP1G2O75843 785 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ENDOD1O94919 500 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CRYABP02511 175 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 GLI1P08151 1106 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 KRT5P13647 590 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CTSOP43234 321 aaPredicted RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ACADSBP45954 432 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 DCAF7P61962 342 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CUL1Q13616 776 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 TLR1Q15399 786 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ERCC6LQ2NKX8 1250 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CHRFAM7AQ494W8 412 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 IZUMO3Q5VZ72 239 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 MEX3DQ86XN8 651 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PSTKQ8IV42 348 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CLYBLQ8N0X4 340 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 RAB7BQ96AH8 199 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CYFIP2Q96F07 1278 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 KCNK16Q96T55 309 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 OLA1Q9NTK5 396 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CDC42EP3Q9UKI2 254 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CLDN5O00501 218 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 HMBSP08397 361 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CHRNA3P32297 505 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 EFEMP1Q12805 493 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SIX1Q15475 284 aaPredicted RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 TERF2Q15554 542 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 C3AR1Q16581 482 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 UBAP2Q5T6F2 1119 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PIK3R6Q5UE93 754 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 EMBQ6PCB8 327 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 AENQ8WTP8 325 aaKnown RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SLC35F5Q8WV83 523 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 TEKT4Q8WW24 435 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 TFAP2BQ92481 460 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CENPIQ92674 756 aaPredicted RBP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 VOPP1Q96AW1 172 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 PARD6BQ9BYG5 372 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 TMEM168Q9H0V1 697 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 ADAM22Q9P0K1 906 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 CTTNBP2NLQ9P2B4 639 aa6.57□□□□□ -1.36
CSTF3-201ENST00000323959 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSTF3-201ENST00000323959 KIF1CO43896 1103 aaKnown RBP6.56□□□□□ -1.36
CSTF3-201ENST00000323959 SPAG6O75602 509 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 PLK1P53350 603 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 AIF1P55008 147 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms