RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-201ENST00000309328 OAS3Q9Y6K5 1087 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-201ENST00000309328 PI4KAP42356 2102 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 GVINP1Q7Z2Y8 2422 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 LMO7DNF2Z398 122 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 SCAMP1O15126 338 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 GRID2O43424 1007 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 DNAJC6O75061 913 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 ATP1B2P14415 290 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 DGKAP23743 735 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 MCM3P25205 808 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 GNPDA1P46926 289 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 CLCNKAP51800 687 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 ADARP55265 1226 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 TYSND1Q2T9J0 566 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 BCL7AQ4VC05 210 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 TEX35Q5T0J7 233 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 STPG1Q5TH74 334 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 KDM7AQ6ZMT4 941 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 DBX2Q6ZNG2 339 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 KIAA0408Q6ZU52 694 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 RD3Q7Z3Z2 195 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 TRAPPC5Q8IUR0 188 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 PALM2Q8IXS6 379 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 PIANPQ8IYJ0 282 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 AGGF1Q8N302 714 aaeCLIP17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 GSDMBQ8TAX9 411 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 TIMM29Q9BSF4 260 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 LRRC61Q9BV99 259 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 C20orf96Q9NUD7 363 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 EVA1BQ9NVM1 165 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 INTS10Q9NVR2 710 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 NSMCE4AQ9NXX6 385 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 BPTFQ12830 3046 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 ZNF292O60281 2723 aa17.68■□□□□ 0.42
SSSCA1-201ENST00000309328 NDUFS3O75489 264 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 TUBBP07437 444 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 RHOXF2BP0C7M4 288 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 ZNF8P17098 575 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 ARNTP27540 789 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 SLMAPQ14BN4 828 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 DBN1Q16643 649 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 PSAPL1Q6NUJ1 521 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 CES3Q6UWW8 571 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 UNC5AQ6ZN44 842 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 GALNT7Q86SF2 657 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 KCNMB4Q86W47 210 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 CILP2Q8IUL8 1156 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 GPBAR1Q8TDU6 330 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 LINC00615Q96LM1 132 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 FCRL3Q96P31 734 aaPredicted RBP17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 RHOXF2Q9BQY4 288 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 CLPBQ9H078 707 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 NLGN3Q9NZ94 848 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 KLF15Q9UIH9 416 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 DOLKQ9UPQ8 538 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 GPSM3Q9Y4H4 160 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 SCN8AQ9UQD0 1980 aa17.67■□□□□ 0.42
SSSCA1-201ENST00000309328 C4orf47A7E2U8 309 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 H3BMM5 538 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 PRMT5O14744 637 aaPredicted RBP17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 GPR39O43194 453 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 ANXA6P08133 673 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 OR56A5P0C7T3 313 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 SLC2A4P14672 509 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 TNFRSF8P28908 595 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 MAGEA4P43358 317 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 POLD2P49005 469 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 PRLHRP49683 370 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 SHBQ15464 509 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 ZNF542PQ5EBM4 170 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 MARK2Q7KZI7 788 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 CCDC25Q86WR0 208 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 CNTN4Q8IWV2 1026 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 KIAA2013Q8IYS2 634 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 LMX1AQ8TE12 382 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 UBXN4Q92575 508 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 CDKL2Q92772 493 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 GLMNQ92990 594 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 CERS2Q96G23 380 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 CFAP36Q96G28 342 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 FAM96AQ9H5X1 160 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 IL21RQ9HBE5 538 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 MRPL40Q9NQ50 206 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 PCDHB1Q9Y5F3 818 aa17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 ZNF106Q9H2Y7 1883 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-201ENST00000309328 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 PTPRZ1P23471 2315 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 OR51F1A6NGY5 319 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 MTX2O75431 263 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 BANF1O75531 89 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 FTH1P02794 183 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 RPS3P23396 243 aaKnown RBP eCLIP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 PLOD1Q02809 727 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 DMPKQ09013 629 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 TRADDQ15628 312 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms