RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ELAC2Q9BQ52 826 aaKnown RBP17.34■□□□□ 0.37
KRT28-201ENST00000306658 OXSMQ9NWU1 459 aa17.34■□□□□ 0.37
KRT28-201ENST00000306658 TMPRSS11EQ9UL52 423 aa17.34■□□□□ 0.37
KRT28-201ENST00000306658 COQ6Q9Y2Z9 468 aa17.34■□□□□ 0.37
KRT28-201ENST00000306658 PRSS21Q9Y6M0 314 aa17.34■□□□□ 0.37
KRT28-201ENST00000306658 PLXNB3Q9ULL4 1909 aa17.34■□□□□ 0.37
KRT28-201ENST00000306658 A0A1W2PP55 124 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 IQCF5A8MTL0 148 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 FADS2P1A8MWK0 482 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 SLC25A14O95258 325 aaPredicted RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 SERPINE1P05121 402 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 SBK3P0C264 359 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 FGF3P11487 239 aaPredicted RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 ATP1B2P14415 290 aaPredicted RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 ZBTB16Q05516 673 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 DPTQ07507 201 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 BST1Q10588 318 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 SFSWAPQ12872 951 aaKnown RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 MLF2Q15773 248 aaPredicted RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 ZNF852Q6ZMS4 543 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 RHEBL1Q8TAI7 183 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 GLYATL1Q969I3 302 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 CCDC126Q96EE4 140 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 CCDC97Q96F63 343 aaPredicted RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 TFB2MQ9H5Q4 396 aaKnown RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 SPATS2LQ9NUQ6 558 aaKnown RBP17.33■□□□□ 0.37
KRT28-201ENST00000306658 THAP1Q9NVV9 213 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 FBXL12Q9NXK8 326 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 GALPQ9UBC7 116 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 DUSP12Q9UNI6 340 aa17.33■□□□□ 0.37
KRT28-201ENST00000306658 PIKFYVEQ9Y2I7 2098 aa17.33■□□□□ 0.36
KRT28-201ENST00000306658 LRRK1Q38SD2 2015 aa17.33■□□□□ 0.36
KRT28-201ENST00000306658 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 SHISA7A6NL88 538 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 MAGEC1O60732 1142 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 TM7SF2O76062 418 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 PCDH8O95206 1070 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 TRIM16O95361 564 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 MSH3P20585 1137 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 ATP5F1P24539 256 aaPredicted RBP17.32■□□□□ 0.36
KRT28-201ENST00000306658 B4GALNT1Q00973 533 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 TTC31Q49AM3 519 aaPredicted RBP17.32■□□□□ 0.36
KRT28-201ENST00000306658 LIPMQ5VYY2 423 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 OTOAQ7RTW8 1153 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 SLC30A3Q99726 388 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 ALG9Q9H6U8 611 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 LATS2Q9NRM7 1088 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 MTF2Q9Y483 593 aaPredicted RBP17.32■□□□□ 0.36
KRT28-201ENST00000306658 QSOX1O00391 747 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 ZBTB14O43829 449 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 SNX3O60493 162 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 AP2A2O94973 939 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 COL9A1P20849 921 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 CD72P21854 359 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 GPR1P46091 355 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 RGS4P49798 205 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 TAS2R38P59533 333 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 TFF2Q03403 129 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 CRY1Q16526 586 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 ZCCHC23Q6ZST2 131 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 PHYKPLQ8IUZ5 450 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 GIMAP7Q8NHV1 300 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 STAG3L4Q8TBR4 150 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 EEF1AKMT1Q8WVE0 214 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 KIAA1191Q96A73 305 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 SIPA1Q96FS4 1042 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 PDLIM5Q96HC4 596 aaKnown RBP17.32■□□□□ 0.36
KRT28-201ENST00000306658 C7orf26Q96N11 449 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 CD248Q9HCU0 757 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 KLHL42Q9P2K6 505 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 SERGEFQ9UGK8 458 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 MMP17Q9ULZ9 603 aa17.32■□□□□ 0.36
KRT28-201ENST00000306658 NDRG2Q9UN36 371 aaKnown RBP17.32■□□□□ 0.36
KRT28-201ENST00000306658 DLX3O60479 287 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 SNNO75324 88 aaPredicted RBP17.31■□□□□ 0.36
KRT28-201ENST00000306658 DGKAP23743 735 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 TTLL9Q3SXZ7 439 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 RAET1GQ6H3X3 334 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
KRT28-201ENST00000306658 SPATA21Q7Z572 469 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 SLC22A9Q8IVM8 553 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 CPNE9Q8IYJ1 553 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 CACNA2D3Q8IZS8 1091 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 ZBTB2Q8N680 514 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 ANKS4BQ8N8V4 417 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 FAM131CQ96AQ9 280 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 SGF29Q96ES7 293 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 LINGO1Q96FE5 620 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 SEC16BQ96JE7 1060 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 NCKAP1Q9Y2A7 1128 aa17.31■□□□□ 0.36
KRT28-201ENST00000306658 IGLON5A6NGN9 336 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 KPNA5O15131 536 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 TGDSO95455 350 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 TSPAN12O95859 305 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 TPBGLP0DKB5 382 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 TROVE2P10155 538 aaKnown RBP eCLIP17.3■□□□□ 0.36
KRT28-201ENST00000306658 C7P10643 843 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 ACADMP11310 421 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 ITGB6P18564 788 aa17.3■□□□□ 0.36
KRT28-201ENST00000306658 SLC1A6P48664 564 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms