RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 SLC16A4O15374 487 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CA12O43570 354 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 NADKO95544 446 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 IL1AP01583 271 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 HMGN1P05114 100 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 UROSP10746 265 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 IL32P24001 234 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 MAPK3P27361 379 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 IGFALSP35858 605 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC15A1P46059 708 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 MYBPC1Q00872 1141 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAAP100Q0VG06 881 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 TRAF2Q12933 501 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 IL31Q6EBC2 164 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FAAH2Q6GMR7 532 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 LCLAT1Q6UWP7 414 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PLPPR4Q7Z2D5 763 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CFAP206Q8IYR0 622 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC22A15Q8IZD6 547 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 OR52L1Q8NGH7 329 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ADAM32Q8TC27 787 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 EEF1AKMT1Q8WVE0 214 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 PHYHIPQ92561 330 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 HPDLQ96IR7 371 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 VRK1Q99986 396 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 TFB2MQ9H5Q4 396 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 THG1LQ9NWX6 298 aaKnown RBP5.21□□□□□ -1.58
SCN1A-201ENST00000303395 SLC7A8Q9UHI5 535 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 POFUT2Q9Y2G5 429 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 ASTN1O14525 1302 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 CNTNAP2Q9UHC6 1331 aa5.21□□□□□ -1.58
SCN1A-201ENST00000303395 FGFR1P11362 822 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 NRIP1P48552 1158 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 AKR1D1P51857 326 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GNA12Q03113 381 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 NFIXQ14938 502 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ZNHIT3Q15649 155 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RNF44Q7L0R7 432 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PRSS48Q7RTY5 328 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ATCAYQ86WG3 371 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RASAL3Q86YV0 1011 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MINDY1Q8N5J2 469 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SLC16A10Q8TF71 515 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 WNT8BQ93098 351 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PRMT6Q96LA8 375 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CENPOQ9BU64 300 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RIOK2Q9BVS4 552 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 C3orf14Q9HBI5 128 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 POPDC2Q9HBU9 364 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CYP4F12Q9HCS2 524 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 C12orf4Q9NQ89 552 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ABI3Q9P2A4 366 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GMPPBQ9Y5P6 360 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 INTS1Q8N201 2190 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 AFDNP55196 1824 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 C2orf71A6NGG8 1288 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SUPT20HL2P0C7V6 817 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PIM1P11309 404 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FPR1P21462 350 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SOX9P48436 509 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RPS6P62753 249 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CERKQ8TCT0 537 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SLC7A13Q8TCU3 470 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 C2orf15Q8WU43 125 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GATA6Q92908 595 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ENY2Q9NPA8 101 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF214Q9UL59 606 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 VPS4AQ9UN37 437 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FAM159BA6NKW6 160 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PRKAB2O43741 272 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 AP2A1O95782 977 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 IFNGP01579 166 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RETP07949 1114 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 TSPAN19P0C672 248 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 EIF2AK2P19525 551 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FSHRP23945 695 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MYL9P24844 172 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CCNCP24863 283 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 LTKP29376 864 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ECHS1P30084 290 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 S100A3P33764 101 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GRIA3P42263 894 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 GAD2Q05329 585 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 SP140Q13342 867 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 DEF8Q6ZN54 512 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 KLHDC8BQ8IXV7 354 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OR2T12Q8NG77 320 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RHEBL1Q8TAI7 183 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RASGRP4Q8TDF6 673 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 MOAP1Q96BY2 351 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 ARL5BQ96KC2 179 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 KLHL32Q96NJ5 620 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PSKH2Q96QS6 385 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 OR52B2Q96RD2 323 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 THUMPD3Q9BV44 507 aaKnown RBP5.2□□□□□ -1.58
SCN1A-201ENST00000303395 FAIM2Q9BWQ8 316 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 CDADC1Q9BWV3 514 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 XPNPEP3Q9NQH7 507 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 RNF112Q9ULX5 631 aa5.2□□□□□ -1.58
SCN1A-201ENST00000303395 PCDHB7Q9Y5E2 793 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms