RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ADAMTS7Q9UKP4 1686 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 TCAF2A6NFQ2 919 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 H3BN98 237 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 RGS14O43566 566 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 FAM189A1O60320 539 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 NPHS1O60500 1241 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 THRBP10828 461 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 EDNRBP24530 442 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 POLD2P49005 469 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 MEP1AQ16819 746 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 C18orf21Q32NC0 220 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 HSF5Q4G112 596 aaPredicted RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 TTC23Q5W5X9 447 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 VPS37AQ8NEZ2 397 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 ITCHQ96J02 903 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 MUS81Q96NY9 551 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
CASC4-201ENST00000299957 ST14Q9Y5Y6 855 aa13.19□□□□□ -0.3
CASC4-201ENST00000299957 RFXANKO14593 260 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 PTGESO14684 152 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 FGF1P05230 155 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 CDH3P22223 829 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 GABRB3P28472 473 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 CDKN1CP49918 316 aaPredicted RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 NDST2P52849 883 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 SH3BP2P78314 561 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ACSM2AQ08AH3 577 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 PIGGQ5H8A4 983 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ACSM2BQ68CK6 577 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 C3orf30Q96M34 536 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 TRMOQ9BU70 441 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 LMCD1Q9NZU5 365 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 F5P12259 2224 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 BRWD1Q9NSI6 2320 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 H0Y858 1186 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 CDK14O94921 469 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 MLYCDO95822 493 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 TFAP2AP05549 437 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 PRDX3P30048 256 aaKnown RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 CYP2C18P33260 490 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 APLP1P51693 650 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 SLC16A1P53985 500 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 HERVK_113P63132 956 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 HPCAP84074 193 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 BNIP2Q12982 314 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 TRIM74Q86UV6 250 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 TRIM73Q86UV7 250 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 MRGPRX2Q96LB1 330 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 MYOCQ99972 504 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 KIFC1Q9BW19 673 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ERVK-6Q9BXR3 956 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ZDHHC6Q9H6R6 413 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 RMND5AQ9H871 391 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 SMOXQ9NWM0 555 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 DDX60Q8IY21 1712 aaKnown RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 PRKD3O94806 890 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 NDST3O95803 873 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ASGR1P07306 291 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 G6PDP11413 515 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 MSH3P20585 1137 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ST13P50502 369 aaKnown RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 LSAMPQ13449 338 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 HIPK1Q86Z02 1210 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 CILP2Q8IUL8 1156 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 SLC47A1Q96FL8 570 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 NSUN3Q9H649 340 aaKnown RBP13.18□□□□□ -0.3
CASC4-201ENST00000299957 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 SH3GLB1Q9Y371 365 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 GLI3P10071 1580 aa13.18□□□□□ -0.3
CASC4-201ENST00000299957 PLOD2O00469 737 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 AZGP1P25311 298 aaKnown RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 TTPAP49638 278 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 FLT3LGP49771 235 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 MLLT6P55198 1093 aaPredicted RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 FAM189BP81408 668 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 FAM187BQ17R55 369 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 OR10T2Q8NGX3 314 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 TMBIM1Q969X1 311 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 MTERF1Q99551 399 aaKnown RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 PRKAB1Q9Y478 270 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 DNAJC15Q9Y5T4 150 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 GLDCP23378 1020 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 RSBN1Q5VWQ0 802 aaPredicted RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 AFTPHQ6ULP2 937 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms