RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RPS17P08708 135 aaKnown RBP24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 HOXD9P28356 352 aaPredicted RBP24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 IST1P53990 364 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 CYBRD1Q53TN4 286 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 ZNF598Q86UK7 904 aaKnown RBP24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 TRIB2Q92519 343 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.16■■□□□ 1.466e-7■■■□□ 15.7
SPTSSA-201ENST00000298130 LMCD1Q9NZU5 365 aa24.16■■□□□ 1.46
SPTSSA-201ENST00000298130 GIPC1O14908 333 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 TLR5O60602 858 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 RASAL1O95294 804 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 CNPP09543 421 aaKnown RBP24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 CD247P20963 164 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 ZNF140P52738 457 aaPredicted RBP24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 TUBA4AP68366 448 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 DHRSXQ8N5I4 330 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 SGCDQ92629 289 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 TRIB3Q96RU7 358 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 GABRQQ9UN88 632 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 LCHNA4D1U4 455 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 DRGXA6NNA5 263 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 MC4RP32245 332 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 RPS9P46781 194 aaKnown RBP24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 GATMP50440 423 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 SGSHP51688 502 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 ERVPABLB-1P60509 514 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 TYSND1Q2T9J0 566 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 C6orf136Q5SQH8 315 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 ANKRD34AQ69YU3 496 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 PROKR1Q8TCW9 393 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 GPR62Q9BZJ7 368 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 PDFQ9HBH1 243 aa24.15■■□□□ 1.46
SPTSSA-201ENST00000298130 GOLGA8CPA6NN73 597 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 CBX4O00257 560 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 DUSP4Q13115 394 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 LETMD1Q6P1Q0 360 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 C16orf59Q7L2K0 433 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 TAS2R42Q7RTR8 314 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 GPR180Q86V85 440 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 CINPQ9BW66 212 aaPredicted RBP24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 SMPD3Q9NY59 655 aaPredicted RBP24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 ZMYM5Q9UJ78 669 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 COMMD10Q9Y6G5 202 aa24.14■■□□□ 1.46
SPTSSA-201ENST00000298130 RSL1D1O76021 490 aaKnown RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 OAZ2O95190 189 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 ESRRBO95718 433 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 TSPAN12O95859 305 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 PRLP01236 227 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 OGNP20774 298 aaKnown RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 POLR2IP36954 125 aaKnown RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 RAB39AQ14964 217 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 FGD3Q5JSP0 725 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 CTSL3PQ5NE16 218 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 DUS1LQ6P1R4 473 aaKnown RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 Q6ZSR9 355 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 KCTD8Q6ZWB6 473 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 LYSMD3Q7Z3D4 306 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 TMEM199Q8N511 208 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 SEPT8Q92599 483 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 C8orf48Q96LL4 319 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 NLE1Q9NVX2 485 aaPredicted RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 G6PDP11413 515 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 EEF1B2P24534 225 aaKnown RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 ZBED5Q49AG3 693 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 TMTC4Q5T4D3 741 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 GLYATQ6IB77 296 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 XKR5Q6UX68 686 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 DNAJC14Q6Y2X3 702 aaPredicted RBP24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 SPRED1Q7Z699 444 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 UROC1Q96N76 676 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 TRIM54Q9BYV2 358 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 FNIP2Q9P278 1114 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 SUN2Q9UH99 717 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 SCN10AQ9Y5Y9 1956 aa24.14■■□□□ 1.45
SPTSSA-201ENST00000298130 F5H5T6 163 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 GUCA1CO95843 209 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 TCF3P15923 654 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 GNA12Q03113 381 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 NFE2Q16621 373 aaPredicted RBP24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 KCTD21Q4G0X4 260 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 IL27RAQ6UWB1 636 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 C17orf99Q6UX52 265 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 GPRIN3Q6ZVF9 776 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 GPSM1Q86YR5 675 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 SFRP1Q8N474 314 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 FAM86B1Q8N7N1 296 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 UTS2RQ9UKP6 389 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 LDLRP01130 860 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 CAPN1P07384 714 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 CST9Q5W186 159 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 RNF19BQ6ZMZ0 732 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 ITIH5Q86UX2 942 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 MUS81Q96NY9 551 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 TLR8Q9NR97 1041 aaKnown RBP24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 TRMT6Q9UJA5 497 aaKnown RBP24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 PATJQ8NI35 1801 aa24.13■■□□□ 1.45
SPTSSA-201ENST00000298130 CHEK2O96017 543 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 UROSP10746 265 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 ZNF157P51786 506 aaPredicted RBP24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 LAPTM5Q13571 262 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms