RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CARS2Q9HA77 564 aaKnown RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 RAD18Q9NS91 495 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.05□□□□□ -0.965e-15■■■■□ 19.6
HMGN1-201ENST00000288344 TAAR2Q9P1P5 351 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 DKK4Q9UBT3 224 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 RIMKLBQ9ULI2 386 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PADI4Q9UM07 663 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF148Q9UQR1 794 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 MGAQ8IWI9 3026 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PKD1L2Q7Z442 2459 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PIKFYVEQ9Y2I7 2098 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TCRBV7S3A2A0A539 114 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TP73O15350 636 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PSMD3O43242 534 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 VEGFDO43915 354 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 SLC25A14O95258 325 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ANXA6P08133 673 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ALPPL2P10696 532 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 BRAFP15056 766 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TPH1P17752 444 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 IVDP26440 423 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 FDFT1P37268 417 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 GNPDA1P46926 289 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ARSDP51689 593 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CFHR1Q03591 330 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TMEM115Q12893 351 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 LRP8Q14114 963 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PRPSAP1Q14558 356 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ALS2CLQ60I27 953 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 IYDQ6PHW0 289 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ARHGEF18Q6ZSZ5 1173 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 SFRP1Q8N474 314 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ARL14Q8N4G2 192 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ARL10Q8N8L6 244 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 RASGEF1AQ8N9B8 481 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 KYQ8NBH2 561 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 FAM46DQ8NEK8 389 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 OR13J1Q8NGT2 312 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF398Q8TD17 642 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 BLOC1S5Q8TDH9 187 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PATE1Q8WXA2 126 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 PRR11Q96HE9 360 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 CDKN2AIPNLQ96HQ2 116 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF778Q96MU6 729 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 RANBP9Q96S59 729 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 FERMT1Q9BQL6 677 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 SPATA16Q9BXB7 569 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 LRRC40Q9H9A6 602 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 ARFGAP3Q9NP61 516 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 EIF2B3Q9NR50 452 aaKnown RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 NLE1Q9NVX2 485 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-201ENST00000288344 SMARCAL1Q9NZC9 954 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 NCKIPSDQ9NZQ3 722 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 TBC1D29Q9UFV1 150 aa9.05□□□□□ -0.96
HMGN1-201ENST00000288344 URB1O60287 2271 aaKnown RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 CHD6Q8TD26 2715 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GLYATL1P3A0A0U1RQE8 302 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 C1QTNF9BB2RNN3 333 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PPM1DO15297 605 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GRID2O43424 1007 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 NUDT21O43809 227 aaKnown RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 NRDCO43847 1150 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 MTX2O75431 263 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 SRP72O76094 671 aaKnown RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 C1QTNF9P0C862 333 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 CTSEP14091 401 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GLB1P16278 677 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 COILP38432 576 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 SPAM1P38567 509 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PTGIRP43119 386 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 FASLGP48023 281 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 CDKN1CP49918 316 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 CTSCP53634 463 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 ZFP36L1Q07352 338 aaKnown RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 DMPKQ09013 629 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 TARDBPQ13148 414 aaKnown RBP eCLIP9.04□□□□□ -0.969e-9■■■□□ 17.5
HMGN1-201ENST00000288344 CBLBQ13191 982 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 NFATC2Q13469 925 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 KCNJ11Q14654 390 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 RTP5Q14D33 572 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 NR0B2Q15466 257 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 C14orf28Q4W4Y0 310 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GPRC6AQ5T6X5 926 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 ABRAXAS1Q6UWZ7 409 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 C4orf22Q6V702 233 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF574Q6ZN55 896 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 EFL1Q7Z2Z2 1120 aaKnown RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 TMPRSS9Q7Z410 1059 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GLT6D1Q7Z4J2 308 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PIANPQ8IYJ0 282 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 AGGF1Q8N302 714 aaeCLIP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GALNT15Q8N3T1 639 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PAF1Q8N7H5 531 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 OR52K1Q8NGK4 314 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 IFI44Q8TCB0 444 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms