RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TOP3BO95985 862 aaKnown RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 RPLP0P05388 317 aaKnown RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 SLC2A4P14672 509 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 JUPP14923 745 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ZNF7P17097 686 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 IDSP22304 550 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ACP1P24666 158 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ACRV1P26436 265 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 RPL10P27635 214 aaKnown RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 NMBRP28336 390 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PMLP29590 882 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ALDH4A1P30038 563 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 CA5AP35218 305 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PPARGP37231 505 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 HALP42357 657 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 CDKN1CP49918 316 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 CTSCP53634 463 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 DRG2P55039 364 aaKnown RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 XIAPP98170 497 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 MSLNQ13421 630 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 DHX34Q14147 1143 aaKnown RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 SPIDRQ14159 915 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 AMZ1Q400G9 498 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 MAP9Q49MG5 647 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 GPR33Q49SQ1 333 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SYTL3Q4VX76 610 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 AARS2Q5JTZ9 985 aaKnown RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 PERM1Q5SV97 790 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 HES3Q5TGS1 186 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ZNF534Q76KX8 674 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PCGF5Q86SE9 256 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 AMZ2Q86W34 360 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ZNF761Q86XN6 746 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 NRROSQ86YC3 692 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 MARCH9Q86YJ5 346 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 RASGEF1AQ8N9B8 481 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 FAM181AQ8N9Y4 354 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SPATA4Q8NEY3 305 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 OR4L1Q8NH43 312 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 HEXDCQ8WVB3 486 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ADAMTS14Q8WXS8 1223 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 SGF29Q96ES7 293 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SNF8Q96H20 258 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ZNF514Q96K75 400 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 ZNF778Q96MU6 729 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SERPINB12Q96P63 405 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 TIMM29Q9BSF4 260 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SCNM1Q9BWG6 230 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 DPH5Q9H2P9 285 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PRDM8Q9NQV8 689 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 CATSPERZQ9NTU4 200 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SMOXQ9NWM0 555 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 TOR4AQ9NXH8 423 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ZDHHC3Q9NYG2 299 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 LRIT1Q9P2V4 623 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 TBC1D29Q9UFV1 150 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PCYOX1Q9UHG3 505 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 KLK13Q9UKR3 277 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 ANGPTL2Q9UKU9 493 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 TMPRSS11EQ9UL52 423 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PSMD13Q9UNM6 376 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 PCDHGA1Q9Y5H4 931 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 RNF215Q9Y6U7 377 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 LY6G6EA0A0G2JKS1 128 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SDR42E2A6NKP2 422 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 GOLGA8KD6RF30 607 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 F8W8V4 182 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 GOLGA8TH3BQL2 631 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 H7C0S8 307 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CHUKO15111 745 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 PFDN6O15212 129 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ZW10O43264 779 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 OPA1O60313 960 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 NOBOXO60393 691 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 BANF1O75531 89 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 VAPBO95292 243 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 POLBP06746 335 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 GP1BAP07359 652 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SLC35G4P0C7Q5 338 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CDK4P11802 303 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 MLNP12872 115 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 F3P13726 295 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ATP1B2P14415 290 aaPredicted RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 GLB1P16278 677 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ITGB6P18564 788 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 FOXN2P32314 431 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 PTGIRP43119 386 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ITGA8P53708 1063 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CSE1LP55060 971 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 E2F1Q01094 437 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 HHEXQ03014 270 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CALCOCO2Q13137 446 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ILKQ13418 452 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 THOC5Q13769 683 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 BOP1Q14137 746 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 NFE2L1Q14494 772 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 KRT33BQ14525 404 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 HLTFQ14527 1009 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD44-204ENST00000279452 BRD3Q15059 726 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms