RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 P2RY13Q9BPV8 354 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 MTG2Q9H4K7 406 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 POLMQ9NP87 494 aaPredicted RBP14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 TRAFD1O14545 582 aaPredicted RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 FKBP9O95302 570 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 ARSDP51689 593 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 NAE1Q13564 534 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 FRG1Q14331 258 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 CLEC6AQ6EIG7 209 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 FKBP9P1Q75LS8 142 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 C2CD4AQ8NCU7 369 aaPredicted RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 AARSD1Q9BTE6 412 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 C1orf50Q9BV19 199 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 TXLNGYQ9BZA5 131 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 LMAN2LQ9H0V9 348 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 MAGEE1Q9HCI5 957 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 CDH7Q9ULB5 785 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 A0A0J9YYE9 177 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 TPST1O60507 370 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 SNUPNO95149 360 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 TRBC1P01850 177 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 SRCP12931 536 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 ZNF30P17039 623 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 GPC1P35052 558 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 CLCQ05315 142 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 SLC18A2Q05940 514 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 PRKG2Q13237 762 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 CLP1Q92989 425 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 FAM162AQ96A26 154 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 NOL11Q9H8H0 719 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 IPPKQ9H8X2 491 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 CCL26Q9Y258 94 aa14.33□□□□□ -0.12
PDLIM2-201ENST00000265810 IFNA8P32881 189 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 PGGT1BP53609 377 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 BEND7Q8N7W2 519 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 MGME1Q9BQP7 344 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 SLC25A23Q9BV35 468 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CCDC154A6NI56 674 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 AASDHQ4L235 1098 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 ZNF805Q5CZA5 627 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 GALNT13Q8IUC8 556 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 ZSCAN5AQ9BUG6 496 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 WDR41Q9HAD4 459 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CROTQ9UKG9 612 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 ISM1B1AKI9 464 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 ARSAP15289 507 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 HNF4AP41235 474 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CTSOP43234 321 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 RPL38P63173 70 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 RIPOR1Q6ZS17 1223 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 SYT12Q8IV01 421 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CHST14Q8NCH0 376 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 SORCS3Q9UPU3 1222 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 RFPL1O75677 317 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 SERPINA6P08185 405 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 IDSP22304 550 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CDC16Q13042 620 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 SEMA3BQ13214 749 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 OTUD1Q5VV17 481 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 CPXM2Q8N436 756 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 PNPLA1Q8N8W4 532 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 NMUR2Q9GZQ4 415 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 NUDT4Q9NZJ9 180 aa14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 EIF2B4Q9UI10 523 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-201ENST00000265810 GSRP00390 522 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 PRIM2P49643 509 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 TRIP10Q15642 601 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 ZNF776Q68DI1 518 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 RTL10Q7L3V2 364 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 HBEGFQ99075 208 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 MARCH4Q9P2E8 410 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 UNC5CO95185 931 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 CHRNGP07510 517 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 TCEAL5Q5H9L2 206 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 MPP7Q5T2T1 576 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 SLC44A2Q8IWA5 706 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 PLD6Q8N2A8 252 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 OSCP1Q8WVF1 389 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 CDRT15Q96T59 188 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 VCX3AQ9NNX9 186 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 PCDH12Q9NPG4 1184 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 GDE1Q9NZC3 331 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 A0A0U1RQS6 177 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 OR1I1O60431 355 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 PDE5AO76074 875 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 SIX3O95343 332 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 SLC25A3Q00325 362 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 TNK2Q07912 1038 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 MPP2Q14168 576 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 EIF4HQ15056 248 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 TIFABQ6ZNK6 161 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 CYP4V2Q6ZWL3 525 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 JADE3Q92613 823 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 TFB2MQ9H5Q4 396 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 ZNF395Q9H8N7 513 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms