RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 MIA3Q5JRA6 1907 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 KANSL1LA0AUZ9 987 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 B3GALT4O96024 378 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 CAPN1P07384 714 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SERPINF2P08697 491 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 MATN1P21941 496 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 HRH2P25021 359 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SHMT2P34897 504 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ZNF135P52742 658 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 LSM3P62310 102 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 RAD51Q06609 339 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ZNF33AQ06730 810 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 NR6A1Q15406 480 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SLC36A3Q495N2 470 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 CYBRD1Q53TN4 286 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 FAM171A1Q5VUB5 890 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SPRYD7Q5W111 196 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TOP1MTQ969P6 601 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 C17orf80Q9BSJ5 609 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 C9orf16Q9BUW7 83 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ARHGAP39Q9C0H5 1083 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 GKN1Q9NS71 199 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SMPD3Q9NY59 655 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 ZNHIT2Q9UHR6 403 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 POLR3HQ9Y535 204 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 A0A1W2PP18 115 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TOR1BO14657 336 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 GSNP06396 782 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 IDO1P14902 403 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SH3BGRP55822 239 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 HMGCS1Q01581 520 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 TWF1Q12792 350 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 DUSP4Q13115 394 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 BFSP2Q13515 415 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SERINC3Q13530 473 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ATP6AP1Q15904 470 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ADRM1Q16186 407 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ZBED5Q49AG3 693 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 CTXN3Q4LDR2 81 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 MORN1Q5T089 497 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 NADSYN1Q6IA69 706 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 LETMD1Q6P1Q0 360 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ENPP6Q6UWR7 440 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 ABRAXAS1Q6UWZ7 409 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PHACTR4Q8IZ21 702 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 SLC22A15Q8IZD6 547 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 CLDN19Q8N6F1 224 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 THUMPD3Q9BV44 507 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 OSBPL6Q9BZF3 934 aa9.04□□□□□ -0.96
MSH4-201ENST00000263187 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 FARSBQ9NSD9 589 aaKnown RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 IFT80Q9P2H3 777 aaPredicted RBP9.04□□□□□ -0.96
MSH4-201ENST00000263187 DNAH14Q0VDD8 3507 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 C1orf232A0A0U1RR37 186 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 LOC285095A0A1B0GVY8 99 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 KRT87PA6NCN2 255 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UPK3BL1B0FP48 263 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UPK3BL2E5RIL1 263 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 XYLBO75191 536 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 PRAMEF12O95522 483 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 ALBP02768 609 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 RPL17P18621 184 aaKnown RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 MAP4P27816 1152 aaKnown RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 ALDH4A1P30038 563 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 MC4RP32245 332 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 RFC2P35250 354 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 SGSHP51688 502 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 ERVPABLB-1P60509 514 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 C16orf87Q6PH81 154 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 DENND1CQ8IV53 801 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 FAM126BQ8IXS8 530 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 KLHDC8BQ8IXV7 354 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 DTWD1Q8N5C7 304 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 MINDY1Q8N5J2 469 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 BRSK1Q8TDC3 778 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 GTF3C2Q8WUA4 911 aaPredicted RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 AURKBQ96GD4 344 aaPredicted RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 SLC39A13Q96H72 371 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UHRF1Q96T88 793 aaPredicted RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 CARS2Q9HA77 564 aaKnown RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 TMEM248Q9NWD8 314 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 ABCD2Q9UBJ2 740 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 INVSQ9Y283 1065 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 ZFP37Q9Y6Q3 630 aaPredicted RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 A0A0U1RQF3 1178 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 GNGT2O14610 69 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 BNIP3LO60238 219 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 DFNA5O60443 496 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 TLR5O60602 858 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 CHEK2O96017 543 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UGT1A1P22309 533 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UGT1A4P22310 534 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 MYF6P23409 242 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 SLC6A4P31645 630 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UGT1A3P35503 534 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 UGT1A5P35504 534 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 CAPGP40121 348 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 SLC14A2Q15849 920 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 GTDC1Q4AE62 458 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms