RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 ARMC4Q5T2S8 1044 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 DEPDC1Q5TB30 811 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 GLT6D1Q7Z4J2 308 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 SNX29P2Q8IUI4 249 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 TRIM39Q9HCM9 518 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 TMEM161AQ9NX61 479 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
PEX1-201ENST00000248633 GMEB1Q9Y692 573 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 TCAF2A6NFQ2 919 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
PEX1-201ENST00000248633 AURKAO14965 403 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 ADAMTS4O75173 837 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 CCL5P13501 91 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 RPL26P61254 145 aaKnown RBP13.24□□□□□ -0.29
PEX1-201ENST00000248633 TSNQ15631 228 aaKnown RBP13.24□□□□□ -0.29
PEX1-201ENST00000248633 CYP2A13Q16696 494 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 RAP1GAP2Q684P5 730 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 STX19Q8N4C7 294 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 PPP1R2P1Q96PQ5 205 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 NODALQ96S42 347 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 USE1Q9NZ43 259 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 PDE10AQ9Y233 779 aa13.24□□□□□ -0.29
PEX1-201ENST00000248633 HLA-DPA1P20036 260 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 GLDCP23378 1020 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 TKTP29401 623 aaKnown RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 RUNX1T1Q06455 604 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 MEP1AQ16819 746 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 FAM45BPQ6NSW5 357 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 TAC4Q86UU9 113 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 OR10A6Q8NH74 314 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 FAM45AQ8TCE6 357 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 OTULINQ96BN8 352 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 SERPINB11Q96P15 392 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 EPS8L2Q9H6S3 715 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 SMURF2Q9HAU4 748 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 DYTNA2CJ06 578 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 CD3EAPO15446 510 aaKnown RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 TBX1O43435 398 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 BCAP31P51572 246 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 DGKQP52824 942 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 PSMD5Q16401 504 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 GPRIN3Q6ZVF9 776 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 CCDC80Q76M96 950 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 ADHFE1Q8IWW8 467 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 GIN1Q9NXP7 522 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 KCTD3Q9Y597 815 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 TCRBV5S1A1TA0A578 114 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 PDZK1P1A8MUH7 402 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 XYLBO75191 536 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 FMO3P31513 532 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 ARRB2P32121 409 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 MAGEA10P43363 369 aaPredicted RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 RGS4P49798 205 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 ADAM17P78536 824 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 CLCQ05315 142 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 PDCD4Q53EL6 469 aaKnown RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 ANKRD46Q86W74 232 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 GATAD2AQ86YP4 633 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 CPNE9Q8IYJ1 553 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 UBASH3BQ8TF42 649 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 NSUN5Q96P11 429 aaKnown RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 CYP2S1Q96SQ9 504 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 TRPM5Q9NZQ8 1165 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 ANKRD33BA6NCL7 494 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 BBIP1A8MTZ0 92 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 ARHGEF9O43307 516 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 OR4F21O95013 312 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 GPIP06744 558 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 TRAP1Q12931 704 aaKnown RBP13.23□□□□□ -0.29
PEX1-201ENST00000248633 ZNF621Q6ZSS3 439 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 ANKS3Q6ZW76 656 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 HERC2P3Q9BVR0 1158 aa13.23□□□□□ -0.29
PEX1-201ENST00000248633 PSMD11O00231 422 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 ANGPTL1O95841 491 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 AQP1P29972 269 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 GJA8P48165 433 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 AFF1P51825 1210 aaKnown RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 GRB7Q14451 532 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 SPANXN2Q5MJ10 180 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 VARS2Q5ST30 1063 aaKnown RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 AHSA2Q719I0 299 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 CIR1Q86X95 450 aaPredicted RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 SLC15A4Q8N697 577 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 MCOLN3Q8TDD5 553 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 TMBIM1Q969X1 311 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 MLPHQ9BV36 600 aaPredicted RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 PCDHB8Q9UN66 801 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 PCDHGA7Q9Y5G6 932 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 LOXHD1Q8IVV2 1947 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 PRRC2BQ5JSZ5 2229 aaKnown RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 TPD52L2O43399 206 aaKnown RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 BEST1O76090 585 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 ATE1O95260 518 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms