RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 MPZL2O60487 215 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 RORCP51449 518 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 KCNJ11Q14654 390 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 SYT16Q17RD7 645 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 TRIM40Q6P9F5 258 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 GPN1Q9HCN4 374 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 NFKBIL1Q9UBC1 381 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 ERVK-11Q9UQG0 969 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 PSKH1P11801 424 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 E2F2Q14209 437 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 ZNF460Q14592 562 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 DENND1AQ8TEH3 1009 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 DNAJB3Q8WWF6 145 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 TMBIM1Q969X1 311 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 SEMA3CQ99985 751 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 TUBA1CQ9BQE3 449 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 ELOVL4Q9GZR5 314 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 AKAP7Q9P0M2 348 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 FUOMA2VDF0 154 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 I3L521 148 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 IRF6O14896 467 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MAFO75444 373 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 NFE2Q16621 373 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ANXA8L1Q5VT79 327 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 FAM180AQ6UWF9 173 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 GALNT6Q8NCL4 622 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 PCDH19Q8TAB3 1148 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 TEX47Q8TBZ9 253 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 LRRC58Q96CX6 371 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 SNTG1Q9NSN8 517 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MAXP61244 160 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 GAD2Q05329 585 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 SUZ12Q15022 739 aaKnown RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ZNF404Q494X3 552 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 PCSK9Q8NBP7 692 aaKnown RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 LRTM1Q9HBL6 345 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MAPK12P53778 367 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ACAT2Q9BWD1 397 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 NEK6Q9HC98 313 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ACTR3BQ9P1U1 418 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 CILPO75339 1184 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MTPNP58546 118 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 DET1Q7L5Y6 550 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 LGI2Q8N0V4 545 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MAGEB10Q96LZ2 347 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 TSSK3Q96PN8 268 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 TBC1D14Q9P2M4 693 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 NFASCO94856 1347 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 GSAPA4D1B5 854 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ACOX3O15254 700 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 FYNP06241 537 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 BDNFP23560 247 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 AQP1P29972 269 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 RELAQ04206 551 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 TIFABQ6ZNK6 161 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 BSNDQ8WZ55 320 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 LENG9Q96B70 501 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
HCFC2-201ENST00000229330 BBS4Q96RK4 519 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 SLC39A3Q9BRY0 314 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 COLEC11Q9BWP8 271 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 ITPAQ9BY32 194 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 EBF1Q9UH73 591 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 MKLN1Q9UL63 735 aa13.69□□□□□ -0.22
HCFC2-201ENST00000229330 M0R2N6 131 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 PGK1P00558 417 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 PIRTP0C851 137 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 HOXD12P35452 270 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 KLF1Q13351 362 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 KCNA10Q16322 511 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 RHBDF2Q6PJF5 856 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 TFAP2BQ92481 460 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 FNDC11Q9BVV2 318 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 TRIT1Q9H3H1 467 aaKnown RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 ANKRA2Q9H9E1 313 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 APOBEC3GQ9HC16 384 aaKnown RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 ZDHHC2Q9UIJ5 367 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 TCAF1Q9Y4C2 921 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 IFNA7P01567 189 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 EPORP19235 508 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 RPL3P39023 403 aaKnown RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 ALDH3A2P51648 485 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 DGKZQ13574 1117 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 TCEAL1Q15170 157 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 NRG4Q8WWG1 115 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 C18orf25Q96B23 403 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
HCFC2-201ENST00000229330 XPNPEP1Q9NQW7 623 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
HCFC2-201ENST00000229330 hCG_2039718K7EN88 272 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms