RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 EIF2B3Q9NR50 452 aaKnown RBP12.51□□□□□ -0.41
LSM5-201ENST00000223084 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 TBC1D29Q9UFV1 150 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 CRLS1Q9UJA2 301 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 APPL1Q9UKG1 709 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 DNAJC16Q9Y2G8 782 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 OR51F1A6NGY5 319 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 OR2AG2A6NM03 316 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 GPR89AB7ZAQ6 455 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 KMOO15229 486 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 GPR89BP0CG08 455 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 MSH3P20585 1137 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 ITGALP20701 1170 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 ADRA1DP25100 572 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 FNTAP49354 379 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 CRADDP78560 199 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 TARDBPQ13148 414 aaKnown RBP eCLIP12.5□□□□□ -0.41
LSM5-201ENST00000223084 COL9A2Q14055 689 aaPredicted RBP12.5□□□□□ -0.41
LSM5-201ENST00000223084 KCNJ11Q14654 390 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 INSCQ1MX18 579 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 TSTD2Q5T7W7 516 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 CDCP2Q5VXM1 449 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 TMEM220Q6QAJ8 160 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 ZNF534Q76KX8 674 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 SNX20Q7Z614 316 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 C17orf82Q86X59 251 aaPredicted RBP12.5□□□□□ -0.41
LSM5-201ENST00000223084 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 OR13J1Q8NGT2 312 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 GATA6Q92908 595 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 SGF29Q96ES7 293 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 TTC25Q96NG3 672 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
LSM5-201ENST00000223084 DDX47Q9H0S4 455 aaKnown RBP12.5□□□□□ -0.41
LSM5-201ENST00000223084 PRDM8Q9NQV8 689 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 KCND1Q9NSA2 647 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 LRIT1Q9P2V4 623 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 CLCA2Q9UQC9 943 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 SLC30A1Q9Y6M5 507 aa12.5□□□□□ -0.41
LSM5-201ENST00000223084 ANKRD11Q6UB99 2663 aaPredicted RBP12.5□□□□□ -0.41
LSM5-201ENST00000223084 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
LSM5-201ENST00000223084 HEATR9A2RTY3 570 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 CCDC162PA2VCL2 907 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 H7C0S8 307 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 PPM1DO15297 605 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 GLB1P16278 677 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 TPSB2P20231 275 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 PSMA3P25788 255 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 MGAT1P26572 445 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 PBLDP30039 288 aaPredicted RBP12.49□□□□□ -0.41
LSM5-201ENST00000223084 B4GALNT1Q00973 533 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 CAMK2BQ13554 666 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 TPSAB1Q15661 275 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 TAS2R42Q7RTR8 314 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 C11orf96Q7Z7L8 435 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 ZNF761Q86XN6 746 aaPredicted RBP12.49□□□□□ -0.41
LSM5-201ENST00000223084 PIANPQ8IYJ0 282 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 BEND7Q8N7W2 519 aaPredicted RBP12.49□□□□□ -0.41
LSM5-201ENST00000223084 SLC37A2Q8TED4 501 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 CPT1BQ92523 772 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 HDAC10Q969S8 669 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 C19orf43Q9BQ61 176 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 ZCCHC2Q9C0B9 1178 aaKnown RBP12.49□□□□□ -0.41
LSM5-201ENST00000223084 CHRAC1Q9NRG0 131 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 SCHIP1Q9P0W5 487 aaPredicted RBP12.49□□□□□ -0.41
LSM5-201ENST00000223084 TCAF1Q9Y4C2 921 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
LSM5-201ENST00000223084 COL27A1Q8IZC6 1860 aaPredicted RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 BPTFQ12830 3046 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 TRBV5-4A0A0C4DH59 114 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 A0A1W2PQM1 296 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 A6NCN8 305 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 RHPN2P1A8MT19 583 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 GOLGA8MH3BSY2 632 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SGTAO43765 313 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 NUDT21O43809 227 aaKnown RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 AVILO75366 819 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 POP7O75817 140 aaKnown RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 TMEM63AO94886 807 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 RPLP0P05388 317 aaKnown RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 MAGEA6P43360 314 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 CLCNKAP51800 687 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 OR1D5P58170 312 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 CACNG1Q06432 222 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 BIRC2Q13490 618 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 ST3GAL2Q16842 350 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 FNBP1LQ5T0N5 605 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms