RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Csnk1dQ9DC28 415 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Adam21Q9JI76 729 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ak1Q9R0Y5 194 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm14459A2BI73 179 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ddx43D3Z6P9 646 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm379J3QQ19 296 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cd3gP11942 182 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cyp2a4P15392 494 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cyp2a5P20852 494 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ddx6P54823 483 aaKnown RBP15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pim3P58750 326 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 4930430A15RikQ05AC5 485 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Spire1Q52KF3 598 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Map3k7Q62073 579 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Hs3st2Q673U1 367 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 DdnQ80TS7 710 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Bmt2Q8BXK4 403 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pcdhb7Q8CDY9 829 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Lin7aQ8JZS0 233 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ppp1r16aQ923M0 524 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Atoh8Q99NA2 322 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Kbtbd12Q9D618 625 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Mageb4A2A9R3 556 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zfp846G3X996 541 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Socs5O54928 536 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tpst2O88856 376 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 CkmP07310 381 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Hnf1bP27889 558 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Impdh1P50096 514 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dab2P98078 766 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tmem184cQ3TPR7 525 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ccdc185Q3V118 621 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ephx3Q3V1F8 367 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Eps15l1Q60902 907 aaKnown RBP15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zfyve1Q810J8 777 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 HnmtQ91VF2 295 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Smim11aQ99J19 55 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm6509A0A0J9YUV1 481 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm4924A0A1B0GR71 966 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pnldc1B2RXZ1 531 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm6351K9J7D1 481 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cdh1P09803 884 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 TyrP11344 533 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 RapsnP12672 412 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 St14P56677 855 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 LcorlQ3U285 600 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Lrrc8eQ66JT1 795 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Lrp10Q7TQH7 713 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 HadhaQ8BMS1 763 aaKnown RBP15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Sfrp1Q8C4U3 314 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Olfr809Q8VEX8 328 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 WwoxQ91WL8 414 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Mapk8Q91Y86 384 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tcam1Q99NB3 548 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ccdc97Q9DBT3 340 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ppp1r2Q9DCL8 206 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ing2Q9ESK4 281 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cdh22Q9WTP5 813 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm7275E9Q1B3 247 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Speer4f2E9Q366 295 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dpy19l2P0CW70 773 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Rpl26P61255 145 aaKnown RBP15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pde7aP70453 456 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 HecaQ3V1N5 544 aaKnown RBP15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Taar8aQ5QD07 344 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Six3Q62233 333 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Mea1Q64327 174 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Defb14Q7TNV9 67 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Nup93Q8BJ71 819 aaKnown RBP15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Unc5aQ8K1S4 898 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Olfr448Q8VES9 310 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pdzd3Q99MJ6 498 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Unc50Q9CQ61 259 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dbn1Q9QXS6 706 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Il18rapQ9Z2B1 614 aa15.74■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm13089A2AGW7 455 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zfp169E9Q3R6 731 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Rc3h2P0C090 1187 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cdkl4Q3TZA2 342 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Abi3Q8BYZ1 367 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Slco3a1Q8R3L5 710 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 4933428M09RikQ9D3X3 192 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Nif3l1Q9EQ80 376 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Map7d3A2AEY4 876 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ccdc175E9PVB3 822 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Sod3O09164 251 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Neu1O35657 409 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 ItgalP24063 1163 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cnr2P47936 347 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 AdslP54822 484 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ptpn5P54830 541 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Snrpd1P62315 119 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 TsnQ62348 228 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Atg16l2Q6KAU8 623 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ubxn7Q6P5G6 467 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dennd2cQ6P9P8 914 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tmem214Q8BM55 687 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Thop1Q8C1A5 687 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 MmaaQ8C7H1 415 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 PolbQ8K409 335 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms