RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Kifc3O35231 824 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Azin1O35484 448 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 PthlhP22858 175 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Ufm1P61961 85 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Cpne9Q1RLL3 553 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Hddc2Q3SXD3 199 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 LcorlQ3U285 600 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Kcnh1Q60603 989 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Taf1cQ6PDZ2 836 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr412Q7TRW7 312 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Rd3Q8BRE0 195 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr847Q8VFF4 312 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Tspan11Q9D1D1 253 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Ubqln5Q9D4I8 510 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Sh2d4aQ9D7V1 421 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 2010109A12RikQ9D875 119 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Ndst3Q9EQH7 873 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Slc13a2Q9ES88 586 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Scube2Q9JJS0 997 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 PtsQ9R1Z7 144 aa16.3■□□□□ 0.2
Shh-201ENSMUST00000002708 Ccdc194A0A140LIT1 234 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Ssxb6A2BI74 170 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Vmn2r46L7N282 809 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Serpina3kP07759 418 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 GsnP13020 780 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Npr1P18293 1057 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 InaP46660 501 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 UcmaQ14BU0 138 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Lrfn1Q2WF71 766 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 P2rx3Q3UR32 397 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Dnajc15Q78YY6 149 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Lrrc8dQ8BGR2 859 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 R3hcc1lQ8BJM3 775 aaKnown RBP16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Tmc7Q8C428 726 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Zdhhc13Q9CWU2 622 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Dhx34Q9DBV3 1145 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Fgf22Q9ESS2 162 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Pik3cgQ9JHG7 1102 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Smok1Q9QYZ4 484 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 CtszQ9WUU7 306 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 PikfyveQ9Z1T6 2097 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm3752A6NAT4 150 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm3526E9PZM0 191 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm16427J3QN52 483 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 NapsaO09043 419 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Pbx3O35317 434 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Psmb10O35955 273 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Krt1P04104 637 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 CtsdP18242 410 aaKnown RBP16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Tap1P21958 724 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Acvr2bP27040 536 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Sstr4P49660 385 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Rsrp1Q3UC65 298 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Prss53Q571E5 552 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Lpcat4Q6NVG1 524 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Sept11Q8C1B7 431 aaKnown RBP16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr801Q8VEU1 318 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr665Q8VG79 316 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr589Q8VGV8 317 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Ist1Q9CX00 362 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 PudpQ9D5U5 234 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 IgtpQ9DCE9 423 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Il22Q9JJY9 179 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Map2k5Q9WVS7 448 aa16.29■□□□□ 0.2
Shh-201ENSMUST00000002708 Erich1E9PY43 332 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Vmn2r2L7N2E9 908 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Slc30a3P97441 388 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Inppl1Q6P549 1257 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Rxfp4Q7TQP4 414 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Zfp719Q8BIV1 735 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Nrn1lQ8C4W3 162 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Pdcd2lQ8C5N5 364 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 RhoqQ8R527 205 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Cdkal1Q91WE6 578 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Pwp1Q99LL5 501 aaKnown RBP16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Znrf4Q9DAH2 327 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Ninj2Q9JL89 143 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Adamts9E9PUN6 1931 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Ttll9A2APC3 461 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Mroh7A2AVR2 1279 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Spaca6E9Q8Q8 339 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Sec22bO08547 215 aaKnown RBP16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Man2b1O09159 1013 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Cyp2c38P56655 490 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 InipQ3TXT3 104 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm4951Q3UED7 406 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Kctd21Q3URF8 260 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Actr3bQ641P0 418 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Gpr142Q7TQN9 365 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Znf451Q8C0P7 1056 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 ManbaQ8K2I4 879 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Plcl2Q8K394 1128 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 Gramd1aQ8VEF1 722 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 HnrnprQ8VHM5 632 aaKnown RBP16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 AgkQ9ESW4 421 aa16.28■□□□□ 0.2
Shh-201ENSMUST00000002708 6720489N17RikA0A1Y7VJW0 127 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Xpnpep3B7ZMP1 506 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Capn5O08688 640 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Zfp14P10755 501 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Hmga1P17095 107 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms