RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W YLL054CQ12244 843 aa3.4□□□□□ -1.87
PHD1YKL043W MMP1Q12372 583 aa3.4□□□□□ -1.87
PHD1YKL043W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
PHD1YKL043W UTP10P42945 1769 aaKnown RBP3.4□□□□□ -1.87
PHD1YKL043W TY4B-PA0A0B7P3V8 1104 aa3.39□□□□□ -1.87
PHD1YKL043W TOM70P07213 617 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W SES1P07284 462 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W RPL19AP0CX82 189 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W RPL19BP0CX83 189 aaPredicted RBP3.39□□□□□ -1.87
PHD1YKL043W TAL1P15019 335 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W KAR2P16474 682 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W KTR1P27810 393 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W CDC3P32457 520 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W SLD2P34252 453 aa3.39□□□□□ -1.87
PHD1YKL043W RRP14P36080 434 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W RPC37P36121 282 aa3.39□□□□□ -1.87
PHD1YKL043W GDT1P38301 280 aaPredicted RBP3.39□□□□□ -1.87
PHD1YKL043W SPT8P38915 602 aa3.39□□□□□ -1.87
PHD1YKL043W CCT4P39078 528 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W CTH1P47976 325 aa3.39□□□□□ -1.87
PHD1YKL043W PAP2P53632 584 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W SPO19Q03029 223 aa3.39□□□□□ -1.87
PHD1YKL043W RRB1Q04225 511 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W YMR074CQ04773 145 aa3.39□□□□□ -1.87
PHD1YKL043W YPR097WQ06839 1073 aa3.39□□□□□ -1.87
PHD1YKL043W RTT109Q07794 436 aa3.39□□□□□ -1.87
PHD1YKL043W NOC3Q07896 663 aaPredicted RBP3.39□□□□□ -1.87
PHD1YKL043W CMS1Q07897 291 aaKnown RBP3.39□□□□□ -1.87
PHD1YKL043W PSK2Q08217 1101 aa3.39□□□□□ -1.87
PHD1YKL043W RSF2P46974 1380 aa3.38□□□□□ -1.87
PHD1YKL043W SWI6P09959 803 aa3.38□□□□□ -1.87
PHD1YKL043W YMR085WP0CF18 432 aa3.38□□□□□ -1.87
PHD1YKL043W NAT1P12945 854 aaKnown RBP3.38□□□□□ -1.87
PHD1YKL043W PMR1P13586 950 aa3.38□□□□□ -1.87
PHD1YKL043W PRP16P15938 1071 aaPredicted RBP3.38□□□□□ -1.87
PHD1YKL043W UBP1P25037 809 aa3.38□□□□□ -1.87
PHD1YKL043W PUP2P32379 260 aa3.38□□□□□ -1.87
PHD1YKL043W MFT1P33441 392 aaKnown RBP3.38□□□□□ -1.87
PHD1YKL043W MNR2P35724 969 aa3.38□□□□□ -1.87
PHD1YKL043W DID4P36108 232 aa3.38□□□□□ -1.87
PHD1YKL043W RFT1P38206 574 aaPredicted RBP3.38□□□□□ -1.87
PHD1YKL043W TPS3P38426 1054 aaKnown RBP3.38□□□□□ -1.87
PHD1YKL043W RRM3P38766 723 aa3.38□□□□□ -1.87
PHD1YKL043W MAM1P40065 302 aa3.38□□□□□ -1.87
PHD1YKL043W SPO22P40511 975 aa3.38□□□□□ -1.87
PHD1YKL043W DOT5P40553 215 aa3.38□□□□□ -1.87
PHD1YKL043W HUL5P53119 910 aa3.38□□□□□ -1.87
PHD1YKL043W YGL082WP53155 381 aa3.38□□□□□ -1.87
PHD1YKL043W ATF2P53296 535 aa3.38□□□□□ -1.87
PHD1YKL043W DNM1P54861 757 aa3.38□□□□□ -1.87
PHD1YKL043W RSA3Q05942 220 aaKnown RBP3.38□□□□□ -1.87
PHD1YKL043W GGA1Q06336 557 aa3.38□□□□□ -1.87
PHD1YKL043W OPT2Q06593 877 aa3.38□□□□□ -1.87
PHD1YKL043W ARR1Q06596 294 aa3.38□□□□□ -1.87
PHD1YKL043W YPL150WQ12152 901 aa3.38□□□□□ -1.87
PHD1YKL043W RUD3Q12234 484 aaKnown RBP3.38□□□□□ -1.87
PHD1YKL043W SAC3P46674 1301 aa3.38□□□□□ -1.87
PHD1YKL043W CDC37P06101 506 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W HSC82P15108 705 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W FRS2P15625 503 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W GAL11P19659 1081 aa3.37□□□□□ -1.87
PHD1YKL043W GCD7P32502 381 aaPredicted RBP3.37□□□□□ -1.87
PHD1YKL043W CNS1P33313 385 aa3.37□□□□□ -1.87
PHD1YKL043W PRX1P34227 261 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W YKL133CP36066 463 aa3.37□□□□□ -1.87
PHD1YKL043W RGD1P38339 666 aa3.37□□□□□ -1.87
PHD1YKL043W YNG2P38806 282 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W HXT13P39924 564 aa3.37□□□□□ -1.87
PHD1YKL043W PEA2P40091 420 aa3.37□□□□□ -1.87
PHD1YKL043W HUL4P40985 892 aa3.37□□□□□ -1.87
PHD1YKL043W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PHD1YKL043W GYP7P48365 746 aa3.37□□□□□ -1.87
PHD1YKL043W YPT11P48559 417 aa3.37□□□□□ -1.87
PHD1YKL043W JJJ1P53863 590 aa3.37□□□□□ -1.87
PHD1YKL043W SEC5P89102 971 aa3.37□□□□□ -1.87
PHD1YKL043W CUS1Q02554 436 aaPredicted RBP3.37□□□□□ -1.87
PHD1YKL043W RBA50Q04418 439 aa3.37□□□□□ -1.87
PHD1YKL043W TSR1Q07381 788 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W NOP6Q07623 225 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W NFI1Q12216 726 aa3.37□□□□□ -1.87
PHD1YKL043W GLE1Q12315 538 aa3.37□□□□□ -1.87
PHD1YKL043W RPO41P13433 1351 aaKnown RBP3.37□□□□□ -1.87
PHD1YKL043W COBP00163 385 aa3.36□□□□□ -1.87
PHD1YKL043W VAS1P07806 1104 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W KRS1P15180 591 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W CLN1P20437 546 aa3.36□□□□□ -1.87
PHD1YKL043W UBC1P21734 215 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W MBR1P23493 339 aa3.36□□□□□ -1.87
PHD1YKL043W BUD14P27637 709 aa3.36□□□□□ -1.87
PHD1YKL043W MRT4P33201 236 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W SEG2P34250 1132 aa3.36□□□□□ -1.87
PHD1YKL043W LHS1P36016 881 aa3.36□□□□□ -1.87
PHD1YKL043W PXL1P36166 706 aa3.36□□□□□ -1.87
PHD1YKL043W SRL3P36167 246 aa3.36□□□□□ -1.87
PHD1YKL043W RFC5P38251 354 aa3.36□□□□□ -1.87
PHD1YKL043W TOM71P38825 639 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W CAJ1P39101 391 aa3.36□□□□□ -1.87
PHD1YKL043W ARB1P40024 610 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W SEC26P41810 973 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W GCN20P43535 752 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms